Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1039
         (505 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RLZ5 Cluster: CCAAT-box DNA binding protein subunit B...    34   2.1  
UniRef50_A0DNT1 Cluster: Chromosome undetermined scaffold_58, wh...    33   3.7  
UniRef50_A0BGN4 Cluster: Chromosome undetermined scaffold_106, w...    33   4.8  
UniRef50_A6TTK6 Cluster: Auxin Efflux Carrier; n=1; Alkaliphilus...    32   6.4  
UniRef50_Q9YW44 Cluster: ORF MSV048 putative lipase, similar to ...    32   8.5  

>UniRef50_Q7RLZ5 Cluster: CCAAT-box DNA binding protein subunit B;
           n=2; Plasmodium (Vinckeia)|Rep: CCAAT-box DNA binding
           protein subunit B - Plasmodium yoelii yoelii
          Length = 998

 Score = 33.9 bits (74), Expect = 2.1
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 72  KEYNSFSNIEPKFSYYQYSNSMDYINTYYSQ 164
           K+YNS +N E  ++YY   +S D  N YYS+
Sbjct: 785 KKYNSINNDESHYTYYNKHDSYDKNNKYYSR 815


>UniRef50_A0DNT1 Cluster: Chromosome undetermined scaffold_58, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_58,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 639

 Score = 33.1 bits (72), Expect = 3.7
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +3

Query: 66  LNKEYNSFSNI--EPKFSYYQYSN-SMDYINTYYSQFAIVC*N 185
           +NK+ N  SNI  E  F Y   SN ++DYI   YSQF  +  N
Sbjct: 102 INKQLNHLSNIKIEDNFQYKDGSNQNLDYIERSYSQFKYISFN 144


>UniRef50_A0BGN4 Cluster: Chromosome undetermined scaffold_106,
           whole genome shotgun sequence; n=8; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_106,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 726

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +3

Query: 66  LNKEYN---SFSNIEPKFSYYQYSNSMDYIN-TYYSQFAIVC*NS*TIIGR*ATSVNKIL 233
           +NKE +   SFS+ EP F YY+    ++ ++  +  QFAI   N   IIG    +   IL
Sbjct: 501 INKETSIGYSFSDKEPSFFYYESFGRLNKLDWNFVVQFAITQINENIIIGPYPQNEQDIL 560

Query: 234 LYKFNSIHCVI 266
           + K   I  V+
Sbjct: 561 VLKSQGIKAVL 571


>UniRef50_A6TTK6 Cluster: Auxin Efflux Carrier; n=1; Alkaliphilus
           metalliredigens QYMF|Rep: Auxin Efflux Carrier -
           Alkaliphilus metalliredigens QYMF
          Length = 321

 Score = 32.3 bits (70), Expect = 6.4
 Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = +3

Query: 9   LFILDNNLS-FIDIVTLF*CLNKEYNSFSNIEPKFSYYQYSNSMDYINTYYSQFAI 173
           LFIL NN++  + ++TL   +NK+++       KF++Y +  +  ++N Y ++  +
Sbjct: 5   LFILTNNITPILVLITLGYLMNKKFDLNIQTLTKFNFYIFVPAFTFVNLYTTKIPV 60


>UniRef50_Q9YW44 Cluster: ORF MSV048 putative lipase, similar to
           Rhizopus niveus lipase GB:D12680; n=1; Melanoplus
           sanguinipes entomopoxvirus|Rep: ORF MSV048 putative
           lipase, similar to Rhizopus niveus lipase GB:D12680 -
           Melanoplus sanguinipes entomopoxvirus (MsEPV)
          Length = 288

 Score = 31.9 bits (69), Expect = 8.5
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = -2

Query: 243 ICTIKFYSHLLLIYQLLFMSSNKL*RIDCSKYLCNPSNLSIDNMKI*VRCY*TNCILCLN 64
           IC I F+  +L I + ++ + ++   I+ S+ L  PSN +IDN  I +  Y  N ++  N
Sbjct: 17  IC-IAFFIIILNIKRTIYETLSRDVNIEYSEELIYPSNFNIDNFNIEIYKYLINLLINFN 75

Query: 63  IKIMSRYL*MTD--YYL 19
            +I +    M    YYL
Sbjct: 76  KEISNESYIMNGNIYYL 92


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,892,525
Number of Sequences: 1657284
Number of extensions: 8324621
Number of successful extensions: 18810
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18798
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)