Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1038
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.1  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 36  KWNSFGSNLATSFANLWNSESLADVTLY 119
           K NSF  ++  S +  + +ESL D+T Y
Sbjct: 238 KLNSFHWHITDSHSFPFTAESLPDLTKY 265


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory
          receptor candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 67 VARFEPKLFHFRQYCCCC 14
          V R   +LF F Q+C  C
Sbjct: 9  VKRASNQLFRFGQFCAIC 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,692
Number of Sequences: 336
Number of extensions: 2894
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)