Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1037
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.6  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 260 CYLLYGLVKTVIFVLFILKRIQNNKVNLRCELI 162
           C  L GL+K  + V+F L  + +   N+  E+I
Sbjct: 248 CTTLIGLIKNCVIVIFELYYLSHVCQNVSTEVI 280


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 145 IWWYIQXXXXXXFCKM*LDSYTLRLI 68
           IW+ I       FCK  L++Y+L+LI
Sbjct: 304 IWYSILIKKADSFCKKKLENYSLQLI 329


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 9   FNFFILLITHYFTYCVLDYKINLRV*LSSY 98
           + F ILL  +YF Y  + + ++L   L  Y
Sbjct: 105 YAFIILLCVYYFYYAFIIFTVHLLFLLCIY 134


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 523 CLSSYLYCYD 552
           C++ + YCYD
Sbjct: 247 CITQFYYCYD 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,347
Number of Sequences: 336
Number of extensions: 2223
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)