Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1037
         (647 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0325 + 2631637-2631882,2632715-2632788,2632874-2633006,263...    28   5.6  

>01_01_0325 +
           2631637-2631882,2632715-2632788,2632874-2633006,
           2633091-2633172,2633471-2633580,2633659-2633751,
           2633854-2633904,2634013-2634105,2635257-2636129,
           2636204-2636316,2636436-2636448
          Length = 626

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 472 NIMFSLDKGITLLYFIWTCISLKVSIEINDFIYI 371
           N +F L+ G+ L +F   C++L+  +E N F+ I
Sbjct: 328 NYLFFLENGLDLSHFEGFCLTLEEFLERNSFLKI 361


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,010,524
Number of Sequences: 37544
Number of extensions: 166610
Number of successful extensions: 252
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)