Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1037
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118700-1|AAM50560.1|  414|Drosophila melanogaster AT19640p pro...    28   9.5  
AY099098-1|AAM28948.1|  414|Drosophila melanogaster TRH-like rec...    28   9.5  
AE013599-1212|AAF58717.1|  414|Drosophila melanogaster CG13229-P...    28   9.5  

>AY118700-1|AAM50560.1|  414|Drosophila melanogaster AT19640p
           protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 8/31 (25%), Positives = 21/31 (67%)
 Frame = -2

Query: 496 MLLKVHFTNIMFSLDKGITLLYFIWTCISLK 404
           +L+ +HFT I+ ++  G+T+   +W  ++++
Sbjct: 152 LLVHMHFTQILHTISIGLTVTLAVWRYVAIR 182


>AY099098-1|AAM28948.1|  414|Drosophila melanogaster TRH-like
           receptor protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 8/31 (25%), Positives = 21/31 (67%)
 Frame = -2

Query: 496 MLLKVHFTNIMFSLDKGITLLYFIWTCISLK 404
           +L+ +HFT I+ ++  G+T+   +W  ++++
Sbjct: 152 LLVHMHFTQILHTISIGLTVTLAVWRYVAIR 182


>AE013599-1212|AAF58717.1|  414|Drosophila melanogaster CG13229-PA
           protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 8/31 (25%), Positives = 21/31 (67%)
 Frame = -2

Query: 496 MLLKVHFTNIMFSLDKGITLLYFIWTCISLK 404
           +L+ +HFT I+ ++  G+T+   +W  ++++
Sbjct: 152 LLVHMHFTQILHTISIGLTVTLAVWRYVAIR 182


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,898,073
Number of Sequences: 53049
Number of extensions: 323683
Number of successful extensions: 626
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)