Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1034
         (603 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061125-1|AAL28673.1| 1637|Drosophila melanogaster LD10743p pro...    30   2.1  
AL050231-2|CAB65850.1| 1624|Drosophila melanogaster EG:BACR37P7....    30   2.1  
AE014298-5|AAF45487.2| 1637|Drosophila melanogaster CG2995-PA pr...    30   2.1  
AY069639-1|AAL39784.1|  622|Drosophila melanogaster LD40589p pro...    29   6.4  
AE014297-823|AAF54293.1|  622|Drosophila melanogaster CG9839-PA ...    29   6.4  

>AY061125-1|AAL28673.1| 1637|Drosophila melanogaster LD10743p protein.
          Length = 1637

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 274  VVSRKCIKTEAMMTRCKF*HQKSITVFSP-SLTIRFDNETERILSLHSELI 125
            V  R C+    + T CK+  Q S T  SP + T   +NET  + S ++E I
Sbjct: 1584 VEHRSCVGCRCLTTTCKYASQSSSTNASPTNATTAPENETGTLSSTNTEKI 1634


>AL050231-2|CAB65850.1| 1624|Drosophila melanogaster EG:BACR37P7.2
            protein.
          Length = 1624

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 274  VVSRKCIKTEAMMTRCKF*HQKSITVFSP-SLTIRFDNETERILSLHSELI 125
            V  R C+    + T CK+  Q S T  SP + T   +NET  + S ++E I
Sbjct: 1571 VEHRSCVGCRCLTTTCKYASQSSSTNASPTNATTAPENETGTLSSTNTEKI 1621


>AE014298-5|AAF45487.2| 1637|Drosophila melanogaster CG2995-PA
            protein.
          Length = 1637

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 274  VVSRKCIKTEAMMTRCKF*HQKSITVFSP-SLTIRFDNETERILSLHSELI 125
            V  R C+    + T CK+  Q S T  SP + T   +NET  + S ++E I
Sbjct: 1584 VEHRSCVGCRCLTTTCKYASQSSSTNASPTNATTAPENETGTLSSTNTEKI 1634


>AY069639-1|AAL39784.1|  622|Drosophila melanogaster LD40589p
           protein.
          Length = 622

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 583 MTVMEWSHSGHSLYTSRFHNSY 518
           + +ME  H G ++YTS+F+ SY
Sbjct: 338 LKLMEGYHGGRTVYTSKFYGSY 359


>AE014297-823|AAF54293.1|  622|Drosophila melanogaster CG9839-PA
           protein.
          Length = 622

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 583 MTVMEWSHSGHSLYTSRFHNSY 518
           + +ME  H G ++YTS+F+ SY
Sbjct: 338 LKLMEGYHGGRTVYTSKFYGSY 359


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,688,498
Number of Sequences: 53049
Number of extensions: 455703
Number of successful extensions: 914
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)