Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1033
(636 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 204 4e-53
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 204 4e-53
SB_56| Best HMM Match : Actin (HMM E-Value=0) 204 4e-53
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 204 4e-53
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 2e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 2e-35
SB_54| Best HMM Match : Actin (HMM E-Value=0) 118 3e-27
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-25
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 97 8e-21
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 83 1e-16
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 81 7e-16
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 1e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 43 2e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 41 0.001
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 33 0.19
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 33 0.26
SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22) 32 0.45
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.59
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 31 0.59
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.59
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 31 1.0
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 30 1.4
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.4
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032) 29 2.4
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 3.2
SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12) 29 3.2
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 29 3.2
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 29 3.2
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 3.2
SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026) 29 4.2
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_29052| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0) 28 5.5
SB_34780| Best HMM Match : Pox_A32 (HMM E-Value=0.018) 28 5.5
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_30560| Best HMM Match : Herpes_UL73 (HMM E-Value=4.5) 28 7.3
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_10147| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_8606| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_1363| Best HMM Match : Chorion_3 (HMM E-Value=2.9) 27 9.7
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_15628| Best HMM Match : p450 (HMM E-Value=1.20512e-43) 27 9.7
SB_5156| Best HMM Match : Spectrin (HMM E-Value=0.16) 27 9.7
SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015) 27 9.7
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 204 bits (499), Expect = 4e-53
Identities = 100/126 (79%), Positives = 102/126 (80%)
Frame = +1
Query: 253 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 432
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 433 PAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSPTPSCVWTWPGRDLTDYL 612
PAMYVAIQAVLSLYASGRTTGIV+DS P P GRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYL 190
Query: 613 MKILTE 630
MKILTE
Sbjct: 191 MKILTE 196
Score = 147 bits (356), Expect = 8e-36
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 44 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 223
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 224 SKRGILTLKYP 256
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 204 bits (499), Expect = 4e-53
Identities = 100/126 (79%), Positives = 102/126 (80%)
Frame = +1
Query: 253 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 432
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 433 PAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSPTPSCVWTWPGRDLTDYL 612
PAMYVAIQAVLSLYASGRTTGIV+DS P P GRDLTDYL
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 189
Query: 613 MKILTE 630
MKILTE
Sbjct: 190 MKILTE 195
Score = 144 bits (349), Expect = 5e-35
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 50 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 229
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 230 RGILTLKYP 256
RGILTLKYP
Sbjct: 62 RGILTLKYP 70
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 204 bits (499), Expect = 4e-53
Identities = 100/126 (79%), Positives = 102/126 (80%)
Frame = +1
Query: 253 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 432
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 433 PAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSPTPSCVWTWPGRDLTDYL 612
PAMYVAIQAVLSLYASGRTTGIV+DS P P GRDLTDYL
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 189
Query: 613 MKILTE 630
MKILTE
Sbjct: 190 MKILTE 195
Score = 145 bits (352), Expect = 2e-35
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 50 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 229
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 230 RGILTLKYP 256
RGILTLKYP
Sbjct: 62 RGILTLKYP 70
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 204 bits (499), Expect = 4e-53
Identities = 100/126 (79%), Positives = 102/126 (80%)
Frame = +1
Query: 253 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 432
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 433 PAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSPTPSCVWTWPGRDLTDYL 612
PAMYVAIQAVLSLYASGRTTGIV+DS P P GRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 613 MKILTE 630
MKILTE
Sbjct: 191 MKILTE 196
Score = 151 bits (367), Expect = 3e-37
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = +2
Query: 44 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 223
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 224 SKRGILTLKYP 256
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 185 bits (451), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +1
Query: 253 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 432
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 433 PAMYVAIQAVLSLYASGRTTGIVLDS 510
PAMYVAIQAVLSLYASGRTTGIV+DS
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDS 156
Score = 147 bits (356), Expect = 8e-36
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = +2
Query: 44 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 223
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 224 SKRGILTLKYP 256
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/17 (82%), Positives = 15/17 (88%), Gaps = 2/17 (11%)
Frame = +3
Query: 510 GDGVSHTVPIYE--GYA 554
GDGVSHTVPIYE GY+
Sbjct: 157 GDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 145 bits (352), Expect = 2e-35
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 50 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 229
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 230 RGILTLKYP 256
RGILTLKYP
Sbjct: 62 RGILTLKYP 70
Score = 91.5 bits (217), Expect = 5e-19
Identities = 50/81 (61%), Positives = 54/81 (66%)
Frame = +1
Query: 388 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSPTP 567
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DS P P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 568 SCVWTWPGRDLTDYLMKILTE 630
GRDLTDYLMKILTE
Sbjct: 138 IIRLDLAGRDLTDYLMKILTE 158
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 253 PIEHGIVTNWDDMEKIWHHTF 315
PIEHGIVTNWDDMEKI TF
Sbjct: 70 PIEHGIVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 118 bits (285), Expect = 3e-27
Identities = 60/112 (53%), Positives = 74/112 (66%)
Frame = +1
Query: 295 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 474
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 475 ASGRTTGIVLDSATVSPTPYPSTRDTHSPTPSCVWTWPGRDLTDYLMKILTE 630
ASGRTTG V D P P + GRDLT YL +++TE
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTE 2240
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 68 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 169
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 113 bits (271), Expect = 1e-25
Identities = 58/135 (42%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Frame = +1
Query: 226 QKRYP-DPQIPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREK 399
Q RY + P+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREK
Sbjct: 63 QLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREK 122
Query: 400 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSPTPSCVW 579
M ++MFE + +Y+AIQAVL+LYA G TG+V+DS P P +
Sbjct: 123 MIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRL 182
Query: 580 TWPGRDLTDYLMKIL 624
GRD+T YL+K++
Sbjct: 183 DIAGRDITKYLIKLM 197
Score = 57.6 bits (133), Expect = 8e-09
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 62 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 235
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 236 ILTLKYP 256
+L + YP
Sbjct: 67 MLEVNYP 73
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 97.5 bits (232), Expect = 8e-21
Identities = 47/94 (50%), Positives = 62/94 (65%)
Frame = +1
Query: 343 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSATVS 522
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 523 PTPYPSTRDTHSPTPSCVWTWPGRDLTDYLMKIL 624
P P GRD++ YL +L
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLL 219
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 83.4 bits (197), Expect = 1e-16
Identities = 34/95 (35%), Positives = 60/95 (63%)
Frame = +1
Query: 253 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 432
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 433 PAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPYP 537
PA ++ +VL+ +A+GR+ G+V+DS + P
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVP 97
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 81.0 bits (191), Expect = 7e-16
Identities = 43/74 (58%), Positives = 48/74 (64%)
Frame = +1
Query: 409 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSPTPSCVWTWP 588
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DS P P
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 589 GRDLTDYLMKILTE 630
GRDLTDYLMK++TE
Sbjct: 61 GRDLTDYLMKLMTE 74
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 53 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 169
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 38 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 208
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 209 GDEAQSKRGILTL 247
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = -3
Query: 166 MAGPSDDRGEYGARSIISCETGLAHTGAIVYYQRGNFLV 50
MA +DD GE G+ SI+S ETGLAHTGAI+ Q + +V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +1
Query: 253 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 360
PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 301 PIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 298 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 477
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 478 SGRTTGIVLDSAT 516
+GIV T
Sbjct: 572 YSAVSGIVEQRVT 584
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1
Query: 261 FDGYLRVRIPLLLCASSPTYESFCPIPTITP*WRGLPT 148
+DG + +++ LLL +SSP + S PI TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +1
Query: 448 AIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSPTP 567
AIQ V A RTTGI LD + Y T+ H+PTP
Sbjct: 209 AIQIVYDHQAKERTTGIELDGRRIR-VDYSVTKRAHTPTP 247
>SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22)
Length = 1709
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 428 TRPPCTSPSKPCSRCTRPVVPPVSCWTRRRCLPHRTHLRGIRTP 559
TR T +PCS TR V+P + W R LP R + ++ P
Sbjct: 1531 TRLLATKDFQPCSAKTRRVIPSFTVWRVRGRLPLRFWINIVKNP 1574
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 489 HRYRAGLGDGVSHTVPIYEGYALP-HAILRLDLARSRS 599
H + +GDG +P Y LP + I +LDL++ R+
Sbjct: 423 HLIKISVGDGSKLVIPYYNKGLLPGNVIWKLDLSKDRT 460
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 141 GNTARGASSPAKPALHIPEPLSTT 70
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.59
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 385 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 501
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 31.5 bits (68), Expect = 0.59
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 510 GDGVSHTVPIYEGYALPHAILRLDLA 587
GDGV+H +P+ EGY + I + +A
Sbjct: 69 GDGVTHVIPVAEGYVIGSCIKHIPIA 94
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 141 GNTARGASSPAKPALHIPEPLSTT 70
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 250 IPIEHGIVTNWDDMEKIWHHTFYNE 324
+P + G + NWD ++IW +TF E
Sbjct: 291 LPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +2
Query: 56 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 235
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 236 ILTLKY 253
L Y
Sbjct: 284 YSALFY 289
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 141 GNTARGASSPAKPALHIPEPLSTT 70
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 369 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 461
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 255 GYLRVRIPLLLCASSPTYESFCPIPTITP*WRGLPTI 145
G L +P A+SP Y S P+PT TP PTI
Sbjct: 1210 GALFTPLPHETSATSPPYTSASPVPTTTPSASSSPTI 1246
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 449 PSKPCSRCTRPVVPP 493
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 PIEHGIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 396
P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 134 PFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 421 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSPTPS 570
T TP++ + QA S+ S T V S V+P+ ST+ S TPS
Sbjct: 1840 THLTPSVASSTQAASSVILSAEVTTSVTSSTQVTPSVASSTQAATSVTPS 1889
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +1
Query: 361 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPYPS 540
T+ + ++ + T + T P++ + Q S+ +S + T V S +P+ PS
Sbjct: 1870 TQVTPSVASSTQAATSVTPSTQGMPSVAPSTQMTPSVASSTQVTPSVASSTQAAPSVTPS 1929
Query: 541 TRDTHSPTPS 570
T T S TPS
Sbjct: 1930 TLMTPSVTPS 1939
>SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032)
Length = 216
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 426 QHARHVRRHPSRALAVRVRSYHRYRAGLGDGVSHTVPIYEG 548
QH RHV S ++ S +Y + D + +P YEG
Sbjct: 25 QHERHVGHGKSEGERAQIDSLQKYVRDIFDHIDQIIPKYEG 65
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 322 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 501
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 641 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 695
Query: 502 LDSATVSPTPYPSTRD 549
L + +V P+P P+T D
Sbjct: 696 LSTTSVGPSPTPTTTD 711
>SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12)
Length = 185
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 403 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSP 561
T I F+ + P A A L L SG +G L +ATV+P + D +SP
Sbjct: 26 TYIGFDLSDVPVPESAGTATLGLTRSGDVSGESLVTATVTPLTATAGTDYNSP 78
>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
Length = 284
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 247 QIPIEHGIVTNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLN 378
++ +E G W+D+ + HTF +L + A E +P L+E PLN
Sbjct: 45 EVKLEKGKNQAWEDLRSVNAHTFDVKLFKEADESYP--LSEKPLN 87
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 348 PRPAH*GSPQPQGQ---QREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHR 494
PR A +P+PQ + Q +PDHVR + V SR+ V R+Y R
Sbjct: 704 PRDATTHTPEPQQEPEVQSHMEPDHVRYMLERMSVNYPTSRSSFVDPRTYPR 755
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 322 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 501
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 590 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 644
Query: 502 LDSATVSPTPYPSTRD 549
L + +V P+P P+T D
Sbjct: 645 LSTTSVGPSPTPTTTD 660
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 322 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 501
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 2896 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 2950
Query: 502 LDSATVSPTPYPSTRD 549
L + +V P+P P+T D
Sbjct: 2951 LSTTSVGPSPTPTTTD 2966
>SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026)
Length = 197
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 518 TVAESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLL 387
T+ + + VV D Y + +ATY+ L VSN++ V+ +L
Sbjct: 20 TLGNAVVVVVVYKDPYKQLKKNLATYLIAGLAVSNLLLVVGEIL 63
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 373 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 501
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_29052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 482 VVPPVSCWTRRRCLPHRTHLRGIRTPPRHPAS 577
+VPP C R P TH G+ PPR P+S
Sbjct: 122 LVPP--CVIMRVTPPDETHAAGLSVPPRAPSS 151
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 141 GNTARGASSPAKPALHIPEPLSTT 70
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 141 GNTARGASSPAKPALHIPEPLSTT 70
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0)
Length = 727
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 246 RVRIPLLLCASSPTYESFCPIPTITP 169
RVR L L S+P Y S CP +TP
Sbjct: 601 RVRARLSLHVSAPDYHSTCPRSIVTP 626
>SB_34780| Best HMM Match : Pox_A32 (HMM E-Value=0.018)
Length = 625
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 485 VPPVSCWTRRRCLPHR 532
+P V CWT RR LP R
Sbjct: 336 LPAVECWTARRILPER 351
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +1
Query: 310 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 489
T E VAPE + E ++P+ T + ET TP VA + ++ +
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 490 TGIVLDSATVSPTPYPSTRDTHSP 561
+ TV+P + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
>SB_30560| Best HMM Match : Herpes_UL73 (HMM E-Value=4.5)
Length = 87
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 445 VAIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSPTPS 570
+ I + ++ + TT L S ++ P+P PS PTPS
Sbjct: 18 ITIIIITTITITTITTNTTLPSTSLPPSPSPSPSPPSPPTPS 59
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 434 PPCTSPSKPCSRCTRPVVPPVSC 502
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 156 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 46
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_10147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 434 PPCTSPSKPCS-RCTRPVVPPVSCWTRR-RCLPHRTHLRGIRTPPRHPA 574
P C+ +P S T P S + +R R L HRT I PP +PA
Sbjct: 46 PCCSHRPQPLSILATNPTGCAASRYRQRLRALIHRTSAHAIPNPPFYPA 94
>SB_8606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 489 HRYRAGLGDGVSHTVPIYEGYALP-HAILRLDLARSRS 599
H + +GDG +P Y LP + I +LDL++ R+
Sbjct: 465 HLIKISVGDGSKLVIPYYNKGLLPGNVIWKLDLSKDRT 502
>SB_1363| Best HMM Match : Chorion_3 (HMM E-Value=2.9)
Length = 624
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 466 SLYASGRTTGIVLDSATVSPTPYPSTRD 549
SL+A +G+V S V P PY TRD
Sbjct: 52 SLFAMPVMSGLVHPSTVVIPDPYSDTRD 79
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 502 LDSATVSPTPYPSTRDTHSPTPSCVWTWP 588
L S VS TP + + H PTP C +P
Sbjct: 5 LISLAVSSTPSQMSAERHEPTPQCRLKFP 33
>SB_15628| Best HMM Match : p450 (HMM E-Value=1.20512e-43)
Length = 440
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = +1
Query: 439 MYVAIQAVLSLYASGRTTGIVLDSATVSPTPYPSTRDTHSPTPSCVWTWPGR 594
M V Q+++ L A TT I L S YP ++ WT P R
Sbjct: 305 MEVLAQSLIFLIAGYETTNITLSFVAYSLATYPEVQEKLQREIDSFWTDPER 356
>SB_5156| Best HMM Match : Spectrin (HMM E-Value=0.16)
Length = 415
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +2
Query: 455 KPCSRCTRPVVPPV-SCWTRRRC---LPHRTHLRGIRTPPRHPA 574
K SRC+ +P SC+ RR L T L +RTPP PA
Sbjct: 295 KELSRCSFHAMPRFYSCYLARRSIALLVVHTALNALRTPPLSPA 338
>SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015)
Length = 1052
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 542 VDGYGVGDTVAESSTIPVVRPDAYSESTAWMATYMAGVLNVS 417
+D GV D S T+P ++ TAWMA Y +LN+S
Sbjct: 653 LDNVGVFD---RSKTLPGGGRLCQADGTAWMALYCIVMLNIS 691
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = -1
Query: 234 PLLLCASSPTYESFCPIPTITP*WRGLPTIEGNTARGASSPAKP 103
P C S P F +P P W LP+ E N G SS A P
Sbjct: 2225 PRAECESDPVDSLFSEVP---PEWSTLPSPEQNAFGGDSSWASP 2265
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,880,787
Number of Sequences: 59808
Number of extensions: 619145
Number of successful extensions: 2359
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 2004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2326
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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