Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1032
         (615 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00001C5211 Cluster: PREDICTED: hypothetical protein;...    34   3.1  
UniRef50_UPI000038D800 Cluster: COG2319: FOG: WD40 repeat; n=3; ...    33   5.4  
UniRef50_UPI00015BCE42 Cluster: UPI00015BCE42 related cluster; n...    32   9.4  
UniRef50_Q669C2 Cluster: Phosphogluconate dehydratase; n=9; Gamm...    32   9.4  
UniRef50_A5FRC6 Cluster: Diaminopimelate epimerase; n=3; Dehaloc...    32   9.4  

>UniRef50_UPI00001C5211 Cluster: PREDICTED: hypothetical protein;
           n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
           Mus musculus
          Length = 95

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 25/79 (31%), Positives = 39/79 (49%)
 Frame = +2

Query: 101 NSNRIHL*SSGVYLQTKIPCASCII*PASTLQRDSYTDSRFR*SIVSQTVRVINFIVN*K 280
           N N  H   SGV  +TK+ C+ CI  P +T Q  ++  S F  SI + +V  I      K
Sbjct: 3   NYNASHTMKSGVCKETKVACSYCI--PVTT-QPSTWDTSVFASSISNFSVAAIRTSWQPK 59

Query: 281 EEKKTHAVCSRCDVTEPAR 337
           EE+    +C + +++   R
Sbjct: 60  EERVYPGLCFQRNLSPQGR 78


>UniRef50_UPI000038D800 Cluster: COG2319: FOG: WD40 repeat; n=3;
           Nostoc punctiforme PCC 73102|Rep: COG2319: FOG: WD40
           repeat - Nostoc punctiforme PCC 73102
          Length = 2172

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 13/32 (40%), Positives = 24/32 (75%)
 Frame = +1

Query: 115 PLVKFRRLPSDQNSLRILYNITCFNFTTRFLH 210
           P +KF  +P+D++SLR+++++T  N +T F H
Sbjct: 698 PKLKFPEIPTDESSLRLIFSVTKVN-STNFSH 728


>UniRef50_UPI00015BCE42 Cluster: UPI00015BCE42 related cluster; n=1;
           unknown|Rep: UPI00015BCE42 UniRef100 entry - unknown
          Length = 168

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 14/60 (23%), Positives = 30/60 (50%)
 Frame = +3

Query: 324 PNPRVYPKHPVSHYPLQLNNAIHTRIVTMTIVSQINSDTVIYCPRKIKHTLYVAAVTSPR 503
           P P+V   +PV   P+ + N ++      ++V  I+   +IY  + +K   Y+  + +P+
Sbjct: 53  PQPKVESIYPVDAKPVYVGNKVYFYTECGSMVQAISPGQIIYSGKSLKAYNYIVLIKTPQ 112


>UniRef50_Q669C2 Cluster: Phosphogluconate dehydratase; n=9;
           Gammaproteobacteria|Rep: Phosphogluconate dehydratase -
           Yersinia pseudotuberculosis
          Length = 638

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 306 VAVVTSPNPRVYPKHPVSHYPLQLNNAIH 392
           +A++TS N  +    P  HYP QL +A+H
Sbjct: 68  IAIITSYNDMLSAHQPYEHYPQQLKDALH 96


>UniRef50_A5FRC6 Cluster: Diaminopimelate epimerase; n=3;
           Dehalococcoides|Rep: Diaminopimelate epimerase -
           Dehalococcoides sp. BAV1
          Length = 284

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +3

Query: 306 VAVVTSPNPRVYPKHPVSHYPLQLNNAIHTRIVTMTIVSQINSDTVIYCPRKIK 467
           + V   P+P+ Y    +S +PL +NN    R V +++VS  N   + +C + ++
Sbjct: 126 IPVAAEPDPKHYNGQLISDFPLNINN----RRVLVSLVSMGNPHAIHFCTKPVE 175


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,433,450
Number of Sequences: 1657284
Number of extensions: 9094247
Number of successful extensions: 18844
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18844
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)