Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1029
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.12 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   0.49 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
 Frame = -3

Query: 593 LSCRLSPHSAYSIGFRYLCYPECIYYHQLCIFFV-----FHCASIIFFV 462
           L C    + A+ I   +L +  CIYY  + +FF+     F+CA IIF V
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTV 158


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
 Frame = +2

Query: 122 LAKSHYQMLPSRFLPYKSDARMRTPLPPPE------TISMPTRAQHRTTRST 259
           L+ + YQ+L +     KSD     P+P PE      T S PT+A  + T S+
Sbjct: 371 LSGTKYQILNAINAALKSDEIPPEPVPTPEPQPTQTTESEPTQASEQPTESS 422


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 483 CFHNFLCAVFLHSHSKLKASL 421
           CFH+ L  + L  + +LKA L
Sbjct: 148 CFHSTLLLMILSRYQRLKAQL 168


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -1

Query: 526 VYIIINCVFSSYFTVLP*FSLCRVSTQPF 440
           +Y+++  +F+SYF  +     C++  Q F
Sbjct: 378 IYVLLINIFASYFAYIFGKFACKIMIQGF 406


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -1

Query: 526 VYIIINCVFSSYFTVLP*FSLCRVSTQPF 440
           +Y+++  +F+SYF  +     C++  Q F
Sbjct: 378 IYVLLINIFASYFAYIFGKFACKIMIQGF 406


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -1

Query: 526 VYIIINCVFSSYFTVLP*FSLCRVSTQPF 440
           +Y+++  +F+SYF  +     C++  Q F
Sbjct: 378 IYVLLINIFASYFAYIFGKFACKIMIQGF 406


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -1

Query: 526 VYIIINCVFSSYFTVLP*FSLCRVSTQPF 440
           +Y+++  +F+SYF  +     C++  Q F
Sbjct: 378 IYVLLINIFASYFAYIFGKFACKIMIQGF 406


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 411 NTAQVMPLVWNGCVETRHKENYGSTVKYEENTQLM 515
           N    +P+V +   E RH    G+ +    NT L+
Sbjct: 500 NDLSAVPIVTHSLTELRHLSLEGNPITTLSNTSLL 534


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = +3

Query: 45  RDSITRNITYKSSQHANGDNRVTTRDWRNRIIRCSRRDFYLTNPTR 182
           R  ++  + Y +S  A+GD   + +D+ +RI    +  +Y+T  ++
Sbjct: 445 RAKLSELLRYHTS--ASGDEACSLKDYVSRIKPNQKHIYYITGESK 488


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 39   YGRDSITRNITYKSSQHA 92
            YG+DS+T  +   +  HA
Sbjct: 1382 YGQDSVTHQLIVNAPPHA 1399



 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/45 (22%), Positives = 19/45 (42%)
 Frame = +1

Query: 88   TRTAITELPPEIGEIALSDAPVAIFTLQIRRADADAATSAGNNLN 222
            T   I   PP   +IAL+       T +++  ++D     G  ++
Sbjct: 1388 THQLIVNAPPHAPQIALTSTTTNSLTFKLKPHESDVEPIHGYTIH 1432


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 456 FLHSHSKLKASLGRYSFYLFHLEEKSHHYI*LF 358
           F HSHS  + S G +  ++  + E+ + +  L+
Sbjct: 176 FWHSHSGFQRSDGTFGPFIVRVPEEDNPHAKLY 208


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +1

Query: 34  SVMAVILLLGILLINR 81
           S+ A++L LGILLI++
Sbjct: 141 SLFAIMLPLGILLISQ 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,641
Number of Sequences: 336
Number of extensions: 3282
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)