Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1029
(601 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein LO... 33 1.0
BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence si... 33 1.0
AL512363-1|CAI15113.1| 1011|Homo sapiens el gene, the 5' end of ... 33 1.0
AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA seq... 33 1.0
BC033640-1|AAH33640.1| 1015|Homo sapiens Hermansky-Pudlak syndro... 30 7.1
AJ131721-1|CAB38232.1| 613|Homo sapiens alpha integrin interact... 30 7.1
AF534402-1|AAO25964.1| 1015|Homo sapiens HPS5 protein minor form... 30 7.1
AF534401-1|AAO25963.1| 1129|Homo sapiens HPS5 protein major form... 30 7.1
AF534400-1|AAO25962.1| 1015|Homo sapiens HPS5 protein protein. 30 7.1
AB023234-1|BAA76861.2| 1095|Homo sapiens KIAA1017 protein protein. 30 7.1
D86974-1|BAA13210.2| 884|Homo sapiens KIAA0220 protein. 29 9.4
DQ090887-1|AAY99645.1| 1196|Homo sapiens AHI1 protein. 29 9.4
BC073943-1|AAH73943.1| 361|Homo sapiens DKFZp547E087 protein pr... 29 9.4
AK128772-1|BAC87606.1| 834|Homo sapiens protein ( Homo sapiens ... 29 9.4
AK092262-1|BAC03840.1| 1196|Homo sapiens protein ( Homo sapiens ... 29 9.4
AJ606362-1|CAE54481.1| 1196|Homo sapiens AHI1 protein protein. 29 9.4
AJ459824-1|CAD30871.1| 1196|Homo sapiens AHI1 protein protein. 29 9.4
AB209632-1|BAD92869.1| 854|Homo sapiens PI-3-kinase-related kin... 29 9.4
>BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein
LOC222584 protein.
Length = 1011
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/72 (22%), Positives = 38/72 (52%)
Frame = +3
Query: 198 YLRRKQSQCRRGRSIEQPGVHENFQAIRSLRNEMEKKNQIGNEENVDLPSSTDRKVIYNG 377
+ + + ++ + G+++ + G +++ ++ SL + ++N G ++ + D N
Sbjct: 286 FAQEESARVKHGKALWENGTYQH--SVSSLASVSSQRNLFGRQDKIH---KLDSSYFKNR 340
Query: 378 GIFPLNEKDKTN 413
GI+ LNE DK N
Sbjct: 341 GIYTLNEHDKYN 352
>BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence
similarity 83, member B protein.
Length = 1011
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/72 (22%), Positives = 38/72 (52%)
Frame = +3
Query: 198 YLRRKQSQCRRGRSIEQPGVHENFQAIRSLRNEMEKKNQIGNEENVDLPSSTDRKVIYNG 377
+ + + ++ + G+++ + G +++ ++ SL + ++N G ++ + D N
Sbjct: 286 FAQEESARVKHGKALWENGTYQH--SVSSLASVSSQRNLFGRQDKIH---KLDSSYFKNR 340
Query: 378 GIFPLNEKDKTN 413
GI+ LNE DK N
Sbjct: 341 GIYTLNEHDKYN 352
>AL512363-1|CAI15113.1| 1011|Homo sapiens el gene, the 5' end of the
gene for a novel proteinA, member 8) protein.
Length = 1011
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/72 (22%), Positives = 38/72 (52%)
Frame = +3
Query: 198 YLRRKQSQCRRGRSIEQPGVHENFQAIRSLRNEMEKKNQIGNEENVDLPSSTDRKVIYNG 377
+ + + ++ + G+++ + G +++ ++ SL + ++N G ++ + D N
Sbjct: 286 FAQEESARVKHGKALWENGTYQH--SVSSLASVSSQRNLFGRQDKIH---KLDSSYFKNR 340
Query: 378 GIFPLNEKDKTN 413
GI+ LNE DK N
Sbjct: 341 GIYTLNEHDKYN 352
>AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA
sequence from clone RP3-523K23 on chromosome 6p12.1-12.3
Contains the 3' end of the gene for a novel protein.
).
Length = 1011
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/72 (22%), Positives = 38/72 (52%)
Frame = +3
Query: 198 YLRRKQSQCRRGRSIEQPGVHENFQAIRSLRNEMEKKNQIGNEENVDLPSSTDRKVIYNG 377
+ + + ++ + G+++ + G +++ ++ SL + ++N G ++ + D N
Sbjct: 286 FAQEESARVKHGKALWENGTYQH--SVSSLASVSSQRNLFGRQDKIH---KLDSSYFKNR 340
Query: 378 GIFPLNEKDKTN 413
GI+ LNE DK N
Sbjct: 341 GIYTLNEHDKYN 352
>BC033640-1|AAH33640.1| 1015|Homo sapiens Hermansky-Pudlak syndrome
5 protein.
Length = 1015
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 255 VHENFQAIRSLRNEMEKKNQIGNEENVD 338
V+E+ + I NE EK++ +GNEE+VD
Sbjct: 562 VNESKKGILDEDNEKEKRDSLGNEESVD 589
>AJ131721-1|CAB38232.1| 613|Homo sapiens alpha integrin interacting
protein 63 protein.
Length = 613
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 255 VHENFQAIRSLRNEMEKKNQIGNEENVD 338
V+E+ + I NE EK++ +GNEE+VD
Sbjct: 160 VNESKKGILDEDNEKEKRDSLGNEESVD 187
>AF534402-1|AAO25964.1| 1015|Homo sapiens HPS5 protein minor form
protein.
Length = 1015
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 255 VHENFQAIRSLRNEMEKKNQIGNEENVD 338
V+E+ + I NE EK++ +GNEE+VD
Sbjct: 562 VNESKKGILDEDNEKEKRDSLGNEESVD 589
>AF534401-1|AAO25963.1| 1129|Homo sapiens HPS5 protein major form
protein.
Length = 1129
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 255 VHENFQAIRSLRNEMEKKNQIGNEENVD 338
V+E+ + I NE EK++ +GNEE+VD
Sbjct: 676 VNESKKGILDEDNEKEKRDSLGNEESVD 703
>AF534400-1|AAO25962.1| 1015|Homo sapiens HPS5 protein protein.
Length = 1015
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 255 VHENFQAIRSLRNEMEKKNQIGNEENVD 338
V+E+ + I NE EK++ +GNEE+VD
Sbjct: 562 VNESKKGILDEDNEKEKRDSLGNEESVD 589
>AB023234-1|BAA76861.2| 1095|Homo sapiens KIAA1017 protein protein.
Length = 1095
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 255 VHENFQAIRSLRNEMEKKNQIGNEENVD 338
V+E+ + I NE EK++ +GNEE+VD
Sbjct: 642 VNESKKGILDEDNEKEKRDSLGNEESVD 669
>D86974-1|BAA13210.2| 884|Homo sapiens KIAA0220 protein.
Length = 884
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 140 QMLPSRFLPYKSDARMRTPLPPPETISMPTRAQHRTT 250
QM+ SR LP R+R PLPP ++ T ++ + T
Sbjct: 606 QMIISRHLPSVCGERLRGPLPPSADDNLKTPSERQLT 642
>DQ090887-1|AAY99645.1| 1196|Homo sapiens AHI1 protein.
Length = 1196
Score = 29.5 bits (63), Expect = 9.4
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +1
Query: 61 GILLINRVSTRTAITELPPEIGEIALSDAPVAIFTLQIRRADADAATSAGNNLNADEGAA 240
G N V++ T ELPPEI E + +P +I ++ A S N + D
Sbjct: 1099 GYFPANHVASETLYQELPPEIKERSPPLSPEE--KTKIEKSPAPQKQSINKNKSQDFRLG 1156
Query: 241 SNNQEYMKISKQFAH 285
S + + ++ K+ +H
Sbjct: 1157 SESMTHSEMRKEQSH 1171
>BC073943-1|AAH73943.1| 361|Homo sapiens DKFZp547E087 protein
protein.
Length = 361
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 140 QMLPSRFLPYKSDARMRTPLPPPETISMPTRAQHRTT 250
QM+ SR LP R+R PLPP ++ T ++ + T
Sbjct: 83 QMIISRHLPSVCGERLRGPLPPSADDNLKTPSERQLT 119
>AK128772-1|BAC87606.1| 834|Homo sapiens protein ( Homo sapiens
cDNA FLJ45371 fis, clone BRHIP3017855, highly similar
to Homo sapiens nuclear pore complex interacting protein
(NPIP). ).
Length = 834
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 140 QMLPSRFLPYKSDARMRTPLPPPETISMPTRAQHRTT 250
QM+ SR LP R+R PLPP ++ T ++ + T
Sbjct: 556 QMIISRHLPSVCGERLRGPLPPSADDNLKTPSERQLT 592
>AK092262-1|BAC03840.1| 1196|Homo sapiens protein ( Homo sapiens cDNA
FLJ34943 fis, clone NT2RP7007580. ).
Length = 1196
Score = 29.5 bits (63), Expect = 9.4
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +1
Query: 61 GILLINRVSTRTAITELPPEIGEIALSDAPVAIFTLQIRRADADAATSAGNNLNADEGAA 240
G N V++ T ELPPEI E + +P +I ++ A S N + D
Sbjct: 1099 GYFPANHVASETLYQELPPEIKERSPPLSPEE--KTKIEKSPAPQKQSINKNKSQDFRLG 1156
Query: 241 SNNQEYMKISKQFAH 285
S + + ++ K+ +H
Sbjct: 1157 SESMTHSEMRKEQSH 1171
>AJ606362-1|CAE54481.1| 1196|Homo sapiens AHI1 protein protein.
Length = 1196
Score = 29.5 bits (63), Expect = 9.4
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +1
Query: 61 GILLINRVSTRTAITELPPEIGEIALSDAPVAIFTLQIRRADADAATSAGNNLNADEGAA 240
G N V++ T ELPPEI E + +P +I ++ A S N + D
Sbjct: 1099 GYFPANHVASETLYQELPPEIKERSPPLSPEE--KTKIEKSPAPQKQSINKNKSQDFRLG 1156
Query: 241 SNNQEYMKISKQFAH 285
S + + ++ K+ +H
Sbjct: 1157 SESMTHSEMRKEQSH 1171
>AJ459824-1|CAD30871.1| 1196|Homo sapiens AHI1 protein protein.
Length = 1196
Score = 29.5 bits (63), Expect = 9.4
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +1
Query: 61 GILLINRVSTRTAITELPPEIGEIALSDAPVAIFTLQIRRADADAATSAGNNLNADEGAA 240
G N V++ T ELPPEI E + +P +I ++ A S N + D
Sbjct: 1099 GYFPANHVASETLYQELPPEIKERSPPLSPEE--KTKIEKSPAPQKQSINKNKSQDFRLG 1156
Query: 241 SNNQEYMKISKQFAH 285
S + + ++ K+ +H
Sbjct: 1157 SESMTHSEMRKEQSH 1171
>AB209632-1|BAD92869.1| 854|Homo sapiens PI-3-kinase-related kinase
SMG-1 isoform 1homolog protein.
Length = 854
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 140 QMLPSRFLPYKSDARMRTPLPPPETISMPTRAQHRTT 250
QM+ SR LP R+R PLPP ++ T ++ + T
Sbjct: 618 QMIISRHLPSVCGERLRGPLPPSADDNLKTPSERQLT 654
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,844,943
Number of Sequences: 237096
Number of extensions: 1730461
Number of successful extensions: 8536
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8529
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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