Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1028
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   6.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.4  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 34  FYISNKLVRYIFDSIFWKKKMFRSLCRFISILYGSPVVKLL 156
           ++ISN  V  I    FWKKK +      + +L G  + K L
Sbjct: 61  YFISN--VYQILAYNFWKKKYWSEFLANLKLLKGRKIRKNL 99


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -1

Query: 158 CNSLTTGEPYKIEINLHKLLN-IFFFQNIESNMYLTNL 48
           C SL+  + +KI I L++L+  +FFF +  +++  + +
Sbjct: 75  CASLSFYKAFKIGILLNQLITPLFFFHSFMTSVLFSQV 112


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 20  FYTTYFIFLIN**GTYLIQYFGRKKC 97
           + T  +++LIN   TY+   FG+  C
Sbjct: 128 YMTGIWVWLINISATYICYAFGKFSC 153


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 20  FYTTYFIFLIN**GTYLIQYFGRKKC 97
           + T  +++LIN   TY+   FG+  C
Sbjct: 361 YMTGIWVWLINISATYICYAFGKFSC 386


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 20  FYTTYFIFLIN**GTYLIQYFGRKKC 97
           + T  +++LIN   TY+   FG+  C
Sbjct: 361 YMTGIWVWLINISATYICYAFGKFSC 386


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 113 LHKLLNIFFFQNIESNMYL 57
           LH+L N +F  ++E+N+ +
Sbjct: 324 LHELRNNYFHMDLENNVII 342


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -1

Query: 167 LDSCNSLTTGEPYK--IEINLHKLLN 96
           +DSC+++ TGE +   +  N ++ LN
Sbjct: 381 VDSCSNIQTGEQFARLLRHNFNRHLN 406


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -1

Query: 167 LDSCNSLTTGEPYK--IEINLHKLLN 96
           +DSC+++ TGE +   +  N ++ LN
Sbjct: 388 VDSCSNIQTGEQFARLLRHNFNRHLN 413


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 113 LHKLLNIFFFQNIESNM 63
           LH+L N +F  ++E+N+
Sbjct: 324 LHELRNNYFHMDLENNV 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,309
Number of Sequences: 336
Number of extensions: 3571
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)