Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1026
(604 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 184 4e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 184 4e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 4e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 94 7e-20
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 76 2e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 67 1e-11
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 64 8e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 6e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.002
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.54
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 31 0.72
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.95
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 31 0.95
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 30 1.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.7
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 3.8
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 3.8
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 3.8
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 29 3.8
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 27 8.8
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16) 27 8.8
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 27 8.8
SB_18995| Best HMM Match : rve (HMM E-Value=0.0012) 27 8.8
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 126 bits (304), Expect = 1e-29
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIV+DSGDGV+HTVPIYEGYALPHAI
Sbjct: 147 GRTTGIVMDSGDGVTHTVPIYEGYALPHAI 176
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYAS 145
Score = 123 bits (297), Expect = 1e-28
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIV+DSGDGV+HTVPIYEGYALPHAI
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAI 175
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYAS 145
Score = 124 bits (300), Expect = 4e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIV+DSGDGV+HTVPIYEGYALPHAI
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAI 175
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 130 bits (315), Expect = 6e-31
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIV+DSGDGV+HTVPIYEGYALPHAI
Sbjct: 147 GRTTGIVMDSGDGVTHTVPIYEGYALPHAI 176
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 126 bits (304), Expect = 1e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%), Gaps = 2/27 (7%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYE--GYA 583
GRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 147 GRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 124 bits (300), Expect = 4e-29
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIV+DSGDGV+HTVPIYEGYALPHAI
Sbjct: 109 GRTTGIVMDSGDGVTHTVPIYEGYALPHAI 138
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTF 344
KRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +3
Query: 417 NREKMTQIMFETFNTPAMYVAIQAVLSLYAS 509
N + M +IMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYAS 108
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/87 (49%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Frame = +3
Query: 249 TEKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 425
++ R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 426 KMTQIMFETFNTPAMYVAIQAVLSLYA 506
KM ++MFE + +Y+AIQAVL+LYA
Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYA 148
Score = 50.8 bits (116), Expect = 8e-07
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPH 592
G TG+V+DSGDGV+H P+YEG+ALPH
Sbjct: 150 GLLTGVVIDSGDGVTHICPVYEGFALPH 177
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +1
Query: 91 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQR 255
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA +
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQ 63
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 94.3 bits (224), Expect = 7e-20
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = +3
Query: 324 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 503
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 504 AS 509
AS
Sbjct: 2189 AS 2190
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 198
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHA 595
GRTTG V D GDGVSHTVP+Y+GY LPHA
Sbjct: 2191 GRTTGTVFDCGDGVSHTVPVYDGYWLPHA 2219
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +3
Query: 372 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYAT 171
Score = 61.3 bits (142), Expect = 6e-10
Identities = 24/30 (80%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I
Sbjct: 172 GRTTGVVLDAGDGVSHSVPIYEGFAMPHSI 201
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/76 (35%), Positives = 49/76 (64%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 461
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 462 PAMYVAIQAVLSLYAS 509
PA ++ +VL+ +A+
Sbjct: 63 PAFFLCKNSVLTAFAN 78
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GR+ G+V+DSG + VP+++GY L AI
Sbjct: 79 GRSNGLVIDSGATQTSAVPVHDGYVLQQAI 108
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTG+V DSGDGVSH VPIYEGYALPHAI
Sbjct: 25 GRTTGVVFDSGDGVSHNVPIYEGYALPHAI 54
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 438 IMFETFNTPAMYVAIQAVLSLYAS 509
IMFE FN+PA+YVAIQAVLSLYAS
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYAS 24
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 198
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 67 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 213
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 276 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 389
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 518 TGIVLDSGDGVSHTVPI 568
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 518 TGIVLDSGDGVSHTVPIYEGYALPHAI 598
TG V+DSGDGV+H +P+ EGY + I
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCI 88
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.058
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -2
Query: 195 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 79
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 273 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 425
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 31.1 bits (67), Expect = 0.72
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = +2
Query: 356 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVGRTTGIVLD 535
ACR R PR P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 536 SGDGVSHTVPI 568
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 442 CSKHSTRPPCTSPSKPCSRCTRRSYHRYRAG 534
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.7 bits (66), Expect = 0.95
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
T E VAPE + E ++P+ T + ET TP VA + ++ +V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 519 PVSCWTPATVSPTPCPSTRDTHSP 590
+ TV+P + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 351 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E +APE E P + E+ P+ MT + ET TP VA + + +++ P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 519 PVSCWTPATVSPTPCPSTRDTHSP 590
+ TV+P + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
T E VAPE + E+ L + +T + ET TP VA + + ++ P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 519 PVSCWTPATVSPTPCPSTRDTHSP 590
+ TV+P + T +P
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAP 4996
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 351 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E +APE E P ++ E + P+ + T + +T TP A + ++ A+V
Sbjct: 4264 ETTMAPESTEAPETTIVPETTVAPETTKAPETTVASKTTKTPETTFAPETTMAPEATVAE 4323
Query: 519 PVSCWTPATVSPTPCPSTRDTHSP 590
+ TV+P + T +P
Sbjct: 4324 ETTMAPVTTVAPETTKAPESTEAP 4347
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 30.7 bits (66), Expect = 0.95
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +3
Query: 351 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E APE V T AP + P+ +T + ET PA A++ +L ++VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 519 PVSCWTPATVSP--TPCPST 572
+ + TV+P T P+T
Sbjct: 1383 ETTASSETTVAPETTDAPAT 1402
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +3
Query: 351 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E VAPE L E P+ + +T P VAI++ L+L ++V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 519 PVSCWTPATVSPTPCPSTRDTHSP 590
+ T TV+P + T +P
Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 398 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 490
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNE 353
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 85 EVAALVVDNGSGMCKAGFAGDDAPRAV 165
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = +3
Query: 357 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWT 536
++A + +P + E N K + +K+ Q M +T + + ++ +A +P W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 537 PATVSPTPCPSTRDTHSPT 593
P PT P+ + T +PT
Sbjct: 920 PKIPLPTEPPTEKMTEAPT 938
>SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 481 SKPCSRCTRRSYH--RYRAGLRRRCLPHRAHLRGIRTPP 591
S PC+ C + H + L R PHR LRG +T P
Sbjct: 352 SPPCASCQQYDNHAMNFDVLLNGRSYPHRTPLRGNQTTP 390
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = -2
Query: 171 GKHCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCD 37
G+HC + I C G GA GN+ E C D
Sbjct: 724 GRHCEKDIDECSLGYCKNGATCTNTPGNYSCQCTEFTNGTNCELD 768
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +3
Query: 378 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPT 557
PVL A P A + TQ + P ++ V + A PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 558 PCPSTRDTHSPTP 596
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 195 SGRDGRYGTEGLLCRR*GTEKRGILTLKYPIEHGIVTNW--DDMEKIWHHTFYN 350
+GR+ G+ +CR+ K ++TL + I G+ + D EK+W+HT N
Sbjct: 451 TGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYHTCPN 500
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 390 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTP 560
T+AP L PK T + ET + PA+ +A + + +V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 561 CPSTRDTHSP 590
+T T +P
Sbjct: 575 TAATEITAAP 584
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -1
Query: 256 FSVPHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 77
+ P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 128 YRAPLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 391
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 480 IQAVLSLYASVVPPVSCWTP-ATVSPTPCPSTRDTHSP 590
++ +L+A+VV V+CWTP A + S+ H P
Sbjct: 250 VKVTKTLFATVVGFVTCWTPIAVIDMLDAYSSHQVHVP 287
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 501 YASVVPPVSCWTPATVSPTPCPSTRDTHSPTPFL 602
Y + PPVS P P P PS+ D PFL
Sbjct: 1893 YNPLTPPVS--PPERDQPPPSPSSSDPFGSAPFL 1924
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Frame = -1
Query: 313 SQLVTIPCSMGYLRVRIPLFSVPHLLHKS---------PSVPYRPSRPDGGAFP 179
S+ ++IP G+ R L P L H S P+ PY PS+ G +FP
Sbjct: 3759 SKPISIPSRDGHARAATSLPGSPQLSHLSGRFSSDDVSPTPPYSPSQKQGFSFP 3812
>SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 231 RVLLSHTDHHALMAGPSHDRGKHCARSIISCEAGLAHTGAIVYY 100
R++ S T H + G H G H ++ EAGL I+ +
Sbjct: 37 RLVFSATIEHEYLGGRYHSIGAHISQETSRHEAGLTQISRIIRF 80
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 185 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 75
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = -1
Query: 322 SMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHL 143
+++SQ VT M R +PL S P + KSP V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 142 LRSRPCTYRS 113
P +Y+S
Sbjct: 845 --HEPGSYKS 852
>SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16)
Length = 814
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 501 YASVVPPVSCWTPATVSPTPCPSTRDTHSPTPFL 602
Y + PPVS P P P PS+ D PFL
Sbjct: 547 YNPLTPPVS--PPERDQPPPSPSSSDPFGSAPFL 578
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 11/100 (11%)
Frame = +3
Query: 330 WHHTFYNELRVAPEEH----PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 497
+ H Y + P H P T P P+ + + ++ + P+ ++ +
Sbjct: 170 YKHPSYPTYNIPPTPHTSIPPTPHTSIPPTPRPTYKHPSYPSYKHPSYPSSHIQASLLPH 229
Query: 498 LYASVVPPVSCW------TPAT-VSPTPCPSTRDTHSPTP 596
+ AS++P + TP T + PTP P T +PTP
Sbjct: 230 IQASLLPLIPNTSIPPTPTPHTSIPPTPTPHTSIPPTPTP 269
>SB_18995| Best HMM Match : rve (HMM E-Value=0.0012)
Length = 1225
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 190 GAFPRSRETLREEHHLLRSRPCTYRS 113
G +P S++T R E + +RPCT S
Sbjct: 832 GCYPWSKQTFRHEGPPISARPCTAMS 857
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,708,725
Number of Sequences: 59808
Number of extensions: 568305
Number of successful extensions: 2225
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2215
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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