Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1026
(604 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 3e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 4e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 4e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 1e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 182 2e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 2e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 2e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 164 5e-41
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 157 5e-39
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 156 9e-39
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 110 6e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 2e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 83 2e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 4e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 57 8e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 50 9e-07
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.083
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.7
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 1.8
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 1.8
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 2.4
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 2.4
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 29 3.1
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 29 3.1
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.1
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 29 3.1
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.1
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 28 4.1
At3g28790.1 68416.m03593 expressed protein 28 4.1
At1g66180.1 68414.m07512 aspartyl protease family protein contai... 28 4.1
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 28 5.5
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.2
At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) / ... 27 7.2
At2g39030.1 68415.m04798 GCN5-related N-acetyltransferase (GNAT)... 27 7.2
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 27 7.2
At5g45620.2 68418.m05607 26S proteasome regulatory subunit, puta... 27 9.6
At5g45620.1 68418.m05608 26S proteasome regulatory subunit, puta... 27 9.6
At4g19006.1 68417.m02801 26S proteasome regulatory subunit, puta... 27 9.6
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 27 9.6
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 9.6
At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutam... 27 9.6
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 3e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIVLDSGDGVSHTVPIYEGYALPHAI
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIVLDSGDGVSHTVPIYEGYALPHAI
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIVLDSGDGVSHTVPIYEGYALPHAI
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 1e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIVLDSGDGVSHTVPIYEGYALPHAI
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYAS 147
Score = 104 bits (249), Expect = 5e-23
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIVLDSGDGVSHTVPIYEG++LPHAI
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGFSLPHAI 177
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYAS 147
Score = 104 bits (249), Expect = 5e-23
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIVLDSGDGVSHTVPIYEG++LPHAI
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGFSLPHAI 177
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYAS 147
Score = 104 bits (249), Expect = 5e-23
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIVLDSGDGVSHTVPIYEG++LPHAI
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGFSLPHAI 177
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIVLDSGDGVSHTVPIYEGYALPHAI
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIVLDSGDGVSHTVPIYEGYALPHAI
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 164 bits (398), Expect = 5e-41
Identities = 70/85 (82%), Positives = 80/85 (94%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
+RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFE+F P+MY+ IQAVLSLY+S
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSS 148
Score = 101 bits (243), Expect = 3e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTGIVLDSGDGVSHTVPIYEGYALPHAI
Sbjct: 149 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 178
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 157 bits (381), Expect = 5e-39
Identities = 68/85 (80%), Positives = 79/85 (92%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
+ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMT
Sbjct: 18 RSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMT 77
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETF P+MY+ +QA LSL+AS
Sbjct: 78 QIMFETFAVPSMYIGMQAALSLHAS 102
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTG VLDSGDGVS+ VPIYEG ALPHAI
Sbjct: 103 GRTTGTVLDSGDGVSYIVPIYEGSALPHAI 132
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 156 bits (379), Expect = 9e-39
Identities = 74/103 (71%), Positives = 83/103 (80%)
Frame = +3
Query: 201 RDGRYGTEGLLCRR*GTEKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 380
RDG E + G R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 381 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 509
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+S
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSS 136
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 246
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEE 48
Score = 58.4 bits (135), Expect = 3e-09
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GRTTG+VLD G+ VSHTVP+YEGYALPH I
Sbjct: 137 GRTTGVVLDLGERVSHTVPVYEGYALPHGI 166
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 110 bits (265), Expect = 6e-25
Identities = 46/86 (53%), Positives = 62/86 (72%)
Frame = +3
Query: 249 TEKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 428
+E R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 429 MTQIMFETFNTPAMYVAIQAVLSLYA 506
M + MFE +N +++ IQAVL+LYA
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYA 145
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 243
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
Score = 47.2 bits (107), Expect = 8e-06
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPH 592
G TG+V+DSGDGV+H VP+ +GY+ PH
Sbjct: 147 GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +3
Query: 273 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 452
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 453 FNTPAMYVAIQAVLSLYA 506
FN P +Y+A+ +VL+L A
Sbjct: 146 FNVPGLYIAVNSVLALAA 163
Score = 37.5 bits (83), Expect = 0.007
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 518 TGIVLDSGDGVSHTVPIYEGYALPHAI 598
TG+V+D GDG +H VP+ EGY + I
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCI 199
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 94 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 180
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/85 (41%), Positives = 56/85 (65%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
++MFE + PA+++A VL+ +A+
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFAT 169
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 183
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 31.9 bits (69), Expect = 0.34
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
GR T +V+D G G + P+++GY L A+
Sbjct: 170 GRATSLVVDCGGGSTTISPVHDGYVLQKAV 199
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.1 bits (159), Expect = 4e-12
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 458
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 459 TPAMYVAIQAVLSLYA 506
Y + QAVLSLYA
Sbjct: 117 VSGFYASEQAVLSLYA 132
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 94 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 186
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 428
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 183
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 57.2 bits (132), Expect = 8e-09
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +3
Query: 273 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 452
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 453 FNTPAMYVA-IQAVLSLYASVVPPVS 527
F ++Y+A Q+++ LY + P S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 189
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 440 HVRNIQHARHVRRHPSRALAVRVGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 598
H +++ H R P L+ +V+D G +H VP+ + L HAI
Sbjct: 130 HPQSLVHLYEASRQPDSILSKT---QCSLVVDCGFSFTHAVPVLHNFTLNHAI 179
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 50.4 bits (115), Expect = 9e-07
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 458
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 459 TPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTPFL 602
PA+ + A S + + + C V CP THS PF+
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGI-CKKDGIVL---CPGFTTTHS-IPFV 187
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 243
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.083
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 218 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 81
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.7
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 194 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 108
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 1.7
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 383 DGVFLGGDTQLIVEGMMPNLLHVIPVS 303
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 516 PPVSCWTPATVSPTPCPSTRDTHSPTP 596
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 516 PPVSCWTPATVSPTPCPSTRDTHSPTP 596
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 488
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 489 VLSLYAS 509
VL+LYA+
Sbjct: 241 VLALYAA 247
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 488
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 489 VLSLYAS 509
VL+LYA+
Sbjct: 241 VLALYAA 247
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 28.7 bits (61), Expect = 3.1
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +3
Query: 294 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 467
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 468 MYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPT 593
I +L S +PP+ P+ +S T P+ + + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 28.7 bits (61), Expect = 3.1
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +3
Query: 294 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 467
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 468 MYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPT 593
I +L S +PP+ P+ +S T P+ + + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 267 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 428
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 267 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 428
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 507 SVVPPVSCWTPATVSPTPCPSTRDT-HSPT 593
S+ PP+SC TP PCP + HS T
Sbjct: 644 SIPPPLSCGTPVPSCQLPCPIPQPCGHSDT 673
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 395 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 496
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 516 PPVSCWTPATVSPTPCPSTRDTHSPTP 596
PP S TP SP P P + SPTP
Sbjct: 233 PPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 507 SVVPPVSCWTPATVSP-TPCPSTRDTHSPTP 596
S P S TP+T +P TP PST +PTP
Sbjct: 278 SPTPTPSTPTPSTPTPSTPTPSTPTPSTPTP 308
>At1g66180.1 68414.m07512 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease profile;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]
Length = 430
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 322 SMSSQLVTIPCSMGYLRVRIPLFSVP 245
S+SS T+PCS + RIP F++P
Sbjct: 116 SLSSSFSTLPCSHPLCKPRIPDFTLP 141
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 465 AMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTP 596
+M AI++ S +A++ PV +P SP+P PS + SP+P
Sbjct: 509 SMVGAIESRSSTHATIEDPVCEQSP---SPSPSPSPSPSPSPSP 549
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 194 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 72
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) /
caspase family protein contains similarity to
latex-abundant protein [Hevea brasiliensis] gb:AAD13216;
contains Pfam profile PF00656: ICE-like protease
(caspase) p20 domain
Length = 418
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +3
Query: 474 VAIQAVLSLYASVVP---PVSCWTPATV---SPTPCPSTRDTHSPTPF 599
+A + L +AS P P S P+T PTP P T H+P+PF
Sbjct: 34 IAPEPRLQSHASASPFPFPNSSPAPSTFIYPPPTPSPYTHAPHAPSPF 81
>At2g39030.1 68415.m04798 GCN5-related N-acetyltransferase (GNAT)
family protein similar to SP|Q9SMB8 Tyramine
N-feruloyltransferase 4/11 (EC 2.3.1.110)
(Hydroxycinnamoyl- CoA: tyramine
N-hydroxycinnamoyltransferase) {Nicotiana tabacum};
contains Pfam profile PF00583: acetyltransferase, GNAT
family
Length = 228
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
Frame = +3
Query: 546 VSPTPCPSTRDTHSP--TPFL 602
+SP+P P+T D SP TPFL
Sbjct: 82 ISPSPFPTTHDASSPDFTPFL 102
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 507 SVVPPVSCWTPATVSPTPCPSTRDTHSPT 593
+ +PPV+ TP+ ++ P P T +PT
Sbjct: 36 TALPPVTAETPSPIASPPVPVNEPTPAPT 64
>At5g45620.2 68418.m05607 26S proteasome regulatory subunit,
putative (RPN9) contains similarity to 26S proteasome
subunit p40.5 GI:3618343 from [Homo sapiens]
Length = 350
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 328 IFSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSV 218
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
>At5g45620.1 68418.m05608 26S proteasome regulatory subunit,
putative (RPN9) contains similarity to 26S proteasome
subunit p40.5 GI:3618343 from [Homo sapiens]
Length = 386
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 328 IFSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSV 218
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
>At4g19006.1 68417.m02801 26S proteasome regulatory subunit,
putative (RPN9) similar to 26S proteasome subunit p40.5
[Homo sapiens] gi|3618343|dbj|BAA33214
Length = 386
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 328 IFSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSV 218
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSVIAERTKLSIEDVEHLLMKSLSV 326
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 598 NGVGECVSLVDGHGVGDTVAGVQHDTGGTTDAYSESTAW 482
N + +L GHG G+T G+ + G D SE+ W
Sbjct: 462 NAMEIIAALYTGHGSGNTKLGIDLEEGACKDV-SETKVW 499
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 306 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 455
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutamine
phosphoribosylpyrophosphate amidotransferase /
phosphoribosyldiphosphate 5-amidotransferase identical
to amidophosphoribosyltransferase [Arabidopsis thaliana]
GI:469193; identical to cDNA
amidophosphoribosyltransferase GI:469192
Length = 566
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 325 FSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSVPYRPS 203
FS S L+T P + Y +PLF P L K P + PS
Sbjct: 7 FSSSLSLITKPNNSSYTNQPLPLFPKPFL--KPPHLSLLPS 45
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,356,171
Number of Sequences: 28952
Number of extensions: 367524
Number of successful extensions: 1387
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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