Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1022
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.6  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   5.6  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   7.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.4  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   7.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -3

Query: 65  VSDLLGYTQVSNNRIVLQI 9
           +++LLGY ++   RI+++I
Sbjct: 286 ITNLLGYAKLRGVRIIIEI 304


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 342 LQTSRKRKLCCVFPEFQFNHEGSRKLWRTSNDYIAK 449
           + ++R + L   FP F  + E  R  W+  N    K
Sbjct: 20  VSSTRTKYLRTNFPNFYNDFEVQRYTWKCENQKCVK 55


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 306 GGYYTLYKDSFDS 268
           G Y+  YKD FDS
Sbjct: 107 GIYFEKYKDKFDS 119


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 504 SVVHETDYAQNYKPCLDKFWQCN 436
           +++H      NY  CL K  +CN
Sbjct: 32  AILHNKRLFDNYLQCLLKKGKCN 54


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +2

Query: 119 ASGRIPDSAINATSERPNYEAKNIRLNSVTGWCGK 223
           A G  P    NAT     YE     LN  +GW  K
Sbjct: 292 AGGGSPGPYTNATGFLAYYEICPEILNKDSGWTKK 326


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 351 LFVEKSYFSRTSHNIGG 301
           LFV    +SR S+N+ G
Sbjct: 415 LFVNNQPYSRDSYNLAG 431


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 504 SVVHETDYAQNYKPCLDKFWQCN 436
           +++H      NY  CL K  +CN
Sbjct: 32  AILHNKRLFDNYLQCLLKKGKCN 54


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 528 IPLLQIWTSVVHETDYAQNY 469
           IPL+ IW+S + +  Y   Y
Sbjct: 449 IPLVIIWSSNLSKRPYIYKY 468


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -1

Query: 232 SFLLTTPTRNRIESNIFSFIVRSF*CSIDSGVRYSTRS 119
           +FL+ TPT  R+ +      +R       SG   S RS
Sbjct: 10  AFLILTPTDQRVVTRTIPSFLRDDVERYPSGPELSDRS 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,768
Number of Sequences: 336
Number of extensions: 2985
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)