BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1022 (571 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X01179-1|CAA25619.1| 2351|Homo sapiens protein ( Human mRNA for ... 37 0.057 M88648-1|AAA52420.1| 2351|Homo sapiens coagulation factor VIII p... 37 0.057 M14113-1|AAA52485.1| 2351|Homo sapiens F8C protein. 37 0.057 K01740-1|AAA52484.1| 2351|Homo sapiens F8C protein. 37 0.057 BX890586-1|CAI43241.1| 2351|Homo sapiens coagulation factor VIII... 37 0.057 BX842564-3|CAI41666.1| 2351|Homo sapiens coagulation factor VIII... 37 0.057 BX842559-7|CAI41672.1| 2351|Homo sapiens coagulation factor VIII... 37 0.057 BX470111-13|CAI41660.1| 2351|Homo sapiens coagulation factor VII... 37 0.057 AY769950-1|AAV85964.1| 2351|Homo sapiens coagulation factor VIII... 37 0.057 AF441482-1|AAM22406.1| 1105|Homo sapiens alternate SOS1 protein. 37 0.057 L13857-1|AAA35913.1| 1333|Homo sapiens guanine nucleotide exchan... 32 1.6 AC019171-1|AAX93186.1| 1304|Homo sapiens unknown protein. 32 1.6 AB209140-1|BAD92377.1| 988|Homo sapiens son of sevenless homolo... 32 1.6 X74764-1|CAA52777.1| 855|Homo sapiens protein-tyrosine kinase p... 31 2.9 BC052998-1|AAH52998.1| 855|Homo sapiens discoidin domain recept... 31 2.9 AL445197-3|CAI15941.1| 855|Homo sapiens discoidin domain recept... 31 2.9 AL445197-2|CAI15940.1| 148|Homo sapiens discoidin domain recept... 31 2.9 AL445197-1|CAI15939.1| 130|Homo sapiens discoidin domain recept... 31 2.9 BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein. 30 5.0 AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiqui... 30 5.0 AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiqui... 30 5.0 AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiqui... 30 5.0 AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiqui... 30 5.0 AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligas... 30 5.0 AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting ... 30 5.0 AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligas... 30 5.0 Z94056-1|CAI42776.1| 224|Homo sapiens retinoschisis (X-linked, ... 30 6.6 Z92542-1|CAI42483.1| 224|Homo sapiens retinoschisis (X-linked, ... 30 6.6 AF018963-1|AAC18405.1| 224|Homo sapiens X-linked juvenile retin... 30 6.6 AF014459-1|AAC17928.1| 224|Homo sapiens X-linked juvenile retin... 30 6.6 >X01179-1|CAA25619.1| 2351|Homo sapiens protein ( Human mRNA for factor VIII. ). Length = 2351 Score = 36.7 bits (81), Expect = 0.057 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSERPNYEAKNIRLN---SVTGWCGKQEAFTYVSVDLV 259 PLG+ASG I D I A+ + + K RL+ S+ W K E F+++ VDL+ Sbjct: 2043 PLGMASGHIRDFQITASGQYGQWAPKLARLHYSGSINAWSTK-EPFSWIKVDLL 2095 >M88648-1|AAA52420.1| 2351|Homo sapiens coagulation factor VIII protein. Length = 2351 Score = 36.7 bits (81), Expect = 0.057 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSERPNYEAKNIRLN---SVTGWCGKQEAFTYVSVDLV 259 PLG+ASG I D I A+ + + K RL+ S+ W K E F+++ VDL+ Sbjct: 2043 PLGMASGHIRDFQITASGQYGQWAPKLARLHYSGSINAWSTK-EPFSWIKVDLL 2095 >M14113-1|AAA52485.1| 2351|Homo sapiens F8C protein. Length = 2351 Score = 36.7 bits (81), Expect = 0.057 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSERPNYEAKNIRLN---SVTGWCGKQEAFTYVSVDLV 259 PLG+ASG I D I A+ + + K RL+ S+ W K E F+++ VDL+ Sbjct: 2043 PLGMASGHIRDFQITASGQYGQWAPKLARLHYSGSINAWSTK-EPFSWIKVDLL 2095 >K01740-1|AAA52484.1| 2351|Homo sapiens F8C protein. Length = 2351 Score = 36.7 bits (81), Expect = 0.057 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSERPNYEAKNIRLN---SVTGWCGKQEAFTYVSVDLV 259 PLG+ASG I D I A+ + + K RL+ S+ W K E F+++ VDL+ Sbjct: 2043 PLGMASGHIRDFQITASGQYGQWAPKLARLHYSGSINAWSTK-EPFSWIKVDLL 2095 >BX890586-1|CAI43241.1| 2351|Homo sapiens coagulation factor VIII, procoagulant component (hemophilia A) protein. Length = 2351 Score = 36.7 bits (81), Expect = 0.057 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSERPNYEAKNIRLN---SVTGWCGKQEAFTYVSVDLV 259 PLG+ASG I D I A+ + + K RL+ S+ W K E F+++ VDL+ Sbjct: 2043 PLGMASGHIRDFQITASGQYGQWAPKLARLHYSGSINAWSTK-EPFSWIKVDLL 2095 >BX842564-3|CAI41666.1| 2351|Homo sapiens coagulation factor VIII, procoagulant component (hemophilia A) protein. Length = 2351 Score = 36.7 bits (81), Expect = 0.057 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSERPNYEAKNIRLN---SVTGWCGKQEAFTYVSVDLV 259 PLG+ASG I D I A+ + + K RL+ S+ W K E F+++ VDL+ Sbjct: 2043 PLGMASGHIRDFQITASGQYGQWAPKLARLHYSGSINAWSTK-EPFSWIKVDLL 2095 >BX842559-7|CAI41672.1| 2351|Homo sapiens coagulation factor VIII, procoagulant component (hemophilia A) protein. Length = 2351 Score = 36.7 bits (81), Expect = 0.057 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSERPNYEAKNIRLN---SVTGWCGKQEAFTYVSVDLV 259 PLG+ASG I D I A+ + + K RL+ S+ W K E F+++ VDL+ Sbjct: 2043 PLGMASGHIRDFQITASGQYGQWAPKLARLHYSGSINAWSTK-EPFSWIKVDLL 2095 >BX470111-13|CAI41660.1| 2351|Homo sapiens coagulation factor VIII, procoagulant component (hemophilia A) protein. Length = 2351 Score = 36.7 bits (81), Expect = 0.057 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSERPNYEAKNIRLN---SVTGWCGKQEAFTYVSVDLV 259 PLG+ASG I D I A+ + + K RL+ S+ W K E F+++ VDL+ Sbjct: 2043 PLGMASGHIRDFQITASGQYGQWAPKLARLHYSGSINAWSTK-EPFSWIKVDLL 2095 >AY769950-1|AAV85964.1| 2351|Homo sapiens coagulation factor VIII, procoagulant component (hemophilia A) protein. Length = 2351 Score = 36.7 bits (81), Expect = 0.057 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSERPNYEAKNIRLN---SVTGWCGKQEAFTYVSVDLV 259 PLG+ASG I D I A+ + + K RL+ S+ W K E F+++ VDL+ Sbjct: 2043 PLGMASGHIRDFQITASGQYGQWAPKLARLHYSGSINAWSTK-EPFSWIKVDLL 2095 >AF441482-1|AAM22406.1| 1105|Homo sapiens alternate SOS1 protein. Length = 1105 Score = 36.7 bits (81), Expect = 0.057 Identities = 23/60 (38%), Positives = 29/60 (48%) Frame = +2 Query: 38 PGYILINPRPITCMREPECKVIKPLGLASGRIPDSAINATSERPNYEAKNIRLNSVTGWC 217 PG NPRP T MR P +P ++ RIP+S +T+ PN KN S WC Sbjct: 1038 PGVRPSNPRPGT-MRHPTPLQQEPRKISYSRIPESETESTASAPN-SPKNTVNTSACFWC 1095 >L13857-1|AAA35913.1| 1333|Homo sapiens guanine nucleotide exchange factor protein. Length = 1333 Score = 31.9 bits (69), Expect = 1.6 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +2 Query: 38 PGYILINPRPITCMREPECKVIKPLGLASGRIPDSAINATSERPN 172 PG NPRP T MR P +P ++ RIP+S +T+ PN Sbjct: 1038 PGVRPSNPRPGT-MRHPTPLQQEPRKISYSRIPESETESTASAPN 1081 >AC019171-1|AAX93186.1| 1304|Homo sapiens unknown protein. Length = 1304 Score = 31.9 bits (69), Expect = 1.6 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +2 Query: 38 PGYILINPRPITCMREPECKVIKPLGLASGRIPDSAINATSERPN 172 PG NPRP T MR P +P ++ RIP+S +T+ PN Sbjct: 1009 PGVRPSNPRPGT-MRHPTPLQQEPRKISYSRIPESETESTASAPN 1052 >AB209140-1|BAD92377.1| 988|Homo sapiens son of sevenless homolog 1 variant protein. Length = 988 Score = 31.9 bits (69), Expect = 1.6 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +2 Query: 38 PGYILINPRPITCMREPECKVIKPLGLASGRIPDSAINATSERPN 172 PG NPRP T MR P +P ++ RIP+S +T+ PN Sbjct: 708 PGVRPSNPRPGT-MRHPTPLQQEPRKISYSRIPESETESTASAPN 751 >X74764-1|CAA52777.1| 855|Homo sapiens protein-tyrosine kinase protein. Length = 855 Score = 31.1 bits (67), Expect = 2.9 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 4/41 (9%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSE-RPNYEAKNIRLNSVTG---WC 217 PLG++ G+IPD I A+S+ + AK RL+S G WC Sbjct: 33 PLGMSGGQIPDEDITASSQWSESTAAKYGRLDSEEGDGAWC 73 >BC052998-1|AAH52998.1| 855|Homo sapiens discoidin domain receptor family, member 2 protein. Length = 855 Score = 31.1 bits (67), Expect = 2.9 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 4/41 (9%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSE-RPNYEAKNIRLNSVTG---WC 217 PLG++ G+IPD I A+S+ + AK RL+S G WC Sbjct: 33 PLGMSGGQIPDEDITASSQWSESTAAKYGRLDSEEGDGAWC 73 >AL445197-3|CAI15941.1| 855|Homo sapiens discoidin domain receptor family, member 2 protein. Length = 855 Score = 31.1 bits (67), Expect = 2.9 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 4/41 (9%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSE-RPNYEAKNIRLNSVTG---WC 217 PLG++ G+IPD I A+S+ + AK RL+S G WC Sbjct: 33 PLGMSGGQIPDEDITASSQWSESTAAKYGRLDSEEGDGAWC 73 >AL445197-2|CAI15940.1| 148|Homo sapiens discoidin domain receptor family, member 2 protein. Length = 148 Score = 31.1 bits (67), Expect = 2.9 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 4/41 (9%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSE-RPNYEAKNIRLNSVTG---WC 217 PLG++ G+IPD I A+S+ + AK RL+S G WC Sbjct: 33 PLGMSGGQIPDEDITASSQWSESTAAKYGRLDSEEGDGAWC 73 >AL445197-1|CAI15939.1| 130|Homo sapiens discoidin domain receptor family, member 2 protein. Length = 130 Score = 31.1 bits (67), Expect = 2.9 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 4/41 (9%) Frame = +2 Query: 107 PLGLASGRIPDSAINATSE-RPNYEAKNIRLNSVTG---WC 217 PLG++ G+IPD I A+S+ + AK RL+S G WC Sbjct: 33 PLGMSGGQIPDEDITASSQWSESTAAKYGRLDSEEGDGAWC 73 >BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein. Length = 903 Score = 30.3 bits (65), Expect = 5.0 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +1 Query: 343 YKQAENENYVVYFPNFNLTM---RDPGNYGELAMITLPKFVQARFVILGIVSFMDN 501 +++ + N VYF N N + DP + G+L LP+ + RF + GI F+D+ Sbjct: 444 WEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDH 499 >AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiquitin protein ligase (mouse) protein. Length = 903 Score = 30.3 bits (65), Expect = 5.0 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +1 Query: 343 YKQAENENYVVYFPNFNLTM---RDPGNYGELAMITLPKFVQARFVILGIVSFMDN 501 +++ + N VYF N N + DP + G+L LP+ + RF + GI F+D+ Sbjct: 444 WEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDH 499 >AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiquitin protein ligase (mouse) protein. Length = 862 Score = 30.3 bits (65), Expect = 5.0 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +1 Query: 343 YKQAENENYVVYFPNFNLTM---RDPGNYGELAMITLPKFVQARFVILGIVSFMDN 501 +++ + N VYF N N + DP + G+L LP+ + RF + GI F+D+ Sbjct: 403 WEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDH 458 >AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiquitin protein ligase (mouse) protein. Length = 903 Score = 30.3 bits (65), Expect = 5.0 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +1 Query: 343 YKQAENENYVVYFPNFNLTM---RDPGNYGELAMITLPKFVQARFVILGIVSFMDN 501 +++ + N VYF N N + DP + G+L LP+ + RF + GI F+D+ Sbjct: 444 WEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDH 499 >AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiquitin protein ligase (mouse) protein. Length = 862 Score = 30.3 bits (65), Expect = 5.0 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +1 Query: 343 YKQAENENYVVYFPNFNLTM---RDPGNYGELAMITLPKFVQARFVILGIVSFMDN 501 +++ + N VYF N N + DP + G+L LP+ + RF + GI F+D+ Sbjct: 403 WEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDH 458 >AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligase ITCH protein. Length = 862 Score = 30.3 bits (65), Expect = 5.0 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +1 Query: 343 YKQAENENYVVYFPNFNLTM---RDPGNYGELAMITLPKFVQARFVILGIVSFMDN 501 +++ + N VYF N N + DP + G+L LP+ + RF + GI F+D+ Sbjct: 403 WEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDH 458 >AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting protein 4 protein. Length = 739 Score = 30.3 bits (65), Expect = 5.0 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +1 Query: 343 YKQAENENYVVYFPNFNLTM---RDPGNYGELAMITLPKFVQARFVILGIVSFMDN 501 +++ + N VYF N N + DP + G+L LP+ + RF + GI F+D+ Sbjct: 280 WEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDH 335 >AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligase Itch protein. Length = 862 Score = 30.3 bits (65), Expect = 5.0 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +1 Query: 343 YKQAENENYVVYFPNFNLTM---RDPGNYGELAMITLPKFVQARFVILGIVSFMDN 501 +++ + N VYF N N + DP + G+L LP+ + RF + GI F+D+ Sbjct: 403 WEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDH 458 >Z94056-1|CAI42776.1| 224|Homo sapiens retinoschisis (X-linked, juvenile) 1 protein. Length = 224 Score = 29.9 bits (64), Expect = 6.6 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 10/67 (14%) Frame = +2 Query: 86 PECKVIKPLGLASGRI-PDSAINATSER-----PNYEAKNIRLNSV---TGWCGK-QEAF 235 PEC KPLG SG + PD + E+ ++ A RLNS W K Q++ Sbjct: 61 PECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSS 120 Query: 236 TYVSVDL 256 ++ +DL Sbjct: 121 QWLQIDL 127 >Z92542-1|CAI42483.1| 224|Homo sapiens retinoschisis (X-linked, juvenile) 1 protein. Length = 224 Score = 29.9 bits (64), Expect = 6.6 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 10/67 (14%) Frame = +2 Query: 86 PECKVIKPLGLASGRI-PDSAINATSER-----PNYEAKNIRLNSV---TGWCGK-QEAF 235 PEC KPLG SG + PD + E+ ++ A RLNS W K Q++ Sbjct: 61 PECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSS 120 Query: 236 TYVSVDL 256 ++ +DL Sbjct: 121 QWLQIDL 127 >AF018963-1|AAC18405.1| 224|Homo sapiens X-linked juvenile retinoschisis protein protein. Length = 224 Score = 29.9 bits (64), Expect = 6.6 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 10/67 (14%) Frame = +2 Query: 86 PECKVIKPLGLASGRI-PDSAINATSER-----PNYEAKNIRLNSV---TGWCGK-QEAF 235 PEC KPLG SG + PD + E+ ++ A RLNS W K Q++ Sbjct: 61 PECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSS 120 Query: 236 TYVSVDL 256 ++ +DL Sbjct: 121 QWLQIDL 127 >AF014459-1|AAC17928.1| 224|Homo sapiens X-linked juvenile retinoschisis precursor protein protein. Length = 224 Score = 29.9 bits (64), Expect = 6.6 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 10/67 (14%) Frame = +2 Query: 86 PECKVIKPLGLASGRI-PDSAINATSER-----PNYEAKNIRLNSV---TGWCGK-QEAF 235 PEC KPLG SG + PD + E+ ++ A RLNS W K Q++ Sbjct: 61 PECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSS 120 Query: 236 TYVSVDL 256 ++ +DL Sbjct: 121 QWLQIDL 127 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 86,214,034 Number of Sequences: 237096 Number of extensions: 1857949 Number of successful extensions: 4208 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4074 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4208 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 5816287018 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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