Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1022
         (571 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA...   176   2e-44
AY122132-1|AAM52644.1|  520|Drosophila melanogaster GH25190p pro...    30   2.5  
AY119650-1|AAM50304.1|  363|Drosophila melanogaster RE56970p pro...    30   2.5  
AE014296-2137|AAF49922.2|  363|Drosophila melanogaster CG32103-P...    30   2.5  
AE014296-2136|AAF49921.2|  583|Drosophila melanogaster CG32103-P...    30   2.5  
AE014296-2135|AAS65015.1|  583|Drosophila melanogaster CG32103-P...    30   2.5  
AY094873-1|AAM11226.1|  994|Drosophila melanogaster RE41093p pro...    29   3.3  
AE014296-1548|AAF50346.1|  994|Drosophila melanogaster CG5660-PA...    29   3.3  

>AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA
            protein.
          Length = 3396

 Score =  176 bits (428), Expect = 2e-44
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = +2

Query: 2    EQGSEVLFGCSRPGYILINPRPITCMREPECKVIKPLGLASGRIPDSAINATSERPNYEA 181
            EQ SEV FGC+RPGYILINPRPITC+REPECKVIKPLGL+SGRIPDSAINATSERPNYEA
Sbjct: 1103 EQSSEVYFGCNRPGYILINPRPITCIREPECKVIKPLGLSSGRIPDSAINATSERPNYEA 1162

Query: 182  KNIRLNSVTGWCGKQEAFTYVSVDL 256
            KNIRLNS TGWCGKQEAFTYVSVDL
Sbjct: 1163 KNIRLNSATGWCGKQEAFTYVSVDL 1187



 Score =  173 bits (421), Expect = 1e-43
 Identities = 81/99 (81%), Positives = 88/99 (88%)
 Frame = +1

Query: 256  GKVYRVKAILVKGVVTSDIVGRPTEIRFFYKQAENENYVVYFPNFNLTMRDPGNYGELAM 435
            G++YRVKAILVKGVVT+DIVGRPTEIRFFYKQAE+ENYVVYFPNFNLTMRDPGNYGELAM
Sbjct: 1188 GQIYRVKAILVKGVVTNDIVGRPTEIRFFYKQAESENYVVYFPNFNLTMRDPGNYGELAM 1247

Query: 436  ITLPKFVQARFVILGIVSFMDNACPNLK*WDVKNQAQNP 552
            ITLPKFVQARFVILGIVS+MDNAC   +    +   Q P
Sbjct: 1248 ITLPKFVQARFVILGIVSYMDNACLKFELMGCEEPKQEP 1286



 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = +2

Query: 89  ECKVIKPLGLASGRIPDSAINATSERPNYEAKNIRLNSVTGWCG--KQEAFTYVSVDL 256
           EC+ +  LGL +G IPD +I  +   P Y  + +RLN+  GWCG   +    ++ +DL
Sbjct: 663 ECRPVGDLGLGNGGIPDDSITTSVSEPGYSKEQLRLNT-NGWCGGSSEPGANWILIDL 719



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 23/79 (29%), Positives = 32/79 (40%)
 Frame = +3

Query: 333  KIFLQTSRKRKLCCVFPEFQFNHEGSRKLWRTSNDYIAKICPSKVCNFGHSQFHGQRLSK 512
            + F + +        FP F             +   + K   ++    G   +      K
Sbjct: 1214 RFFYKQAESENYVVYFPNFNLTMRDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLK 1273

Query: 513  FEVMGCEEPSTEPLLGYDY 569
            FE+MGCEEP  EPLLGYDY
Sbjct: 1274 FELMGCEEPKQEPLLGYDY 1292


>AY122132-1|AAM52644.1|  520|Drosophila melanogaster GH25190p
           protein.
          Length = 520

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 333 KIFLQTSRKRKLCCVFPEFQFNHEGSRKLWRTSNDYIAKICPSKVCNF 476
           K++LQ   +R           N  GSR +WR +   + KI P     F
Sbjct: 310 KVYLQVQTQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKF 357


>AY119650-1|AAM50304.1|  363|Drosophila melanogaster RE56970p
           protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 333 KIFLQTSRKRKLCCVFPEFQFNHEGSRKLWRTSNDYIAKICPSKVCNF 476
           K++LQ   +R           N  GSR +WR +   + KI P     F
Sbjct: 90  KVYLQVQTQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKF 137


>AE014296-2137|AAF49922.2|  363|Drosophila melanogaster CG32103-PC,
           isoform C protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 333 KIFLQTSRKRKLCCVFPEFQFNHEGSRKLWRTSNDYIAKICPSKVCNF 476
           K++LQ   +R           N  GSR +WR +   + KI P     F
Sbjct: 90  KVYLQVQTQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKF 137


>AE014296-2136|AAF49921.2|  583|Drosophila melanogaster CG32103-PB,
           isoform B protein.
          Length = 583

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 333 KIFLQTSRKRKLCCVFPEFQFNHEGSRKLWRTSNDYIAKICPSKVCNF 476
           K++LQ   +R           N  GSR +WR +   + KI P     F
Sbjct: 310 KVYLQVQTQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKF 357


>AE014296-2135|AAS65015.1|  583|Drosophila melanogaster CG32103-PA,
           isoform A protein.
          Length = 583

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 333 KIFLQTSRKRKLCCVFPEFQFNHEGSRKLWRTSNDYIAKICPSKVCNF 476
           K++LQ   +R           N  GSR +WR +   + KI P     F
Sbjct: 310 KVYLQVQTQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKF 357


>AY094873-1|AAM11226.1|  994|Drosophila melanogaster RE41093p
           protein.
          Length = 994

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 143 AINATSERPNYEAKNIRLNSVTGWC-GKQEAFTYVSVDLVKFTE 271
           A+N   ER   E    R NSV  WC   + A + + VD V+ TE
Sbjct: 192 AVNVAFERLFEEGLIQRRNSVVNWCTALRSAISDIEVDSVEITE 235


>AE014296-1548|AAF50346.1|  994|Drosophila melanogaster CG5660-PA
           protein.
          Length = 994

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 143 AINATSERPNYEAKNIRLNSVTGWC-GKQEAFTYVSVDLVKFTE 271
           A+N   ER   E    R NSV  WC   + A + + VD V+ TE
Sbjct: 192 AVNVAFERLFEEGLIQRRNSVVNWCTALRSAISDIEVDSVEITE 235


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,254,676
Number of Sequences: 53049
Number of extensions: 549245
Number of successful extensions: 1272
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)