Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1022
         (571 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   2.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   3.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.6  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 317 PTISEVTTPFTRIALTL*TLPDLHS 243
           PT  E+  PF R+ L   T   +HS
Sbjct: 87  PTTQEINKPFKRLELFNITTTTIHS 111


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +1

Query: 361 ENYVVYFPNFNLTMRDPGNYGELAMIT 441
           +N++ Y P   +    PGN+ +L +++
Sbjct: 328 DNWMTYMPPSGIPNWVPGNHDQLRLVS 354


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +1

Query: 361 ENYVVYFPNFNLTMRDPGNYGELAMIT 441
           +N++ Y P   +    PGN+ +L +++
Sbjct: 328 DNWMTYMPPSGIPNWVPGNHDQLRLVS 354


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 268 RVKAILVKGVVTSDIVGRPTEIRFFYKQAENENYVVYF 381
           R++AI + G   SDI G  T I        +EN++ +F
Sbjct: 527 RLEAIRLDGNFLSDINGVFTSIASLLLLNLSENHIEWF 564


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +1

Query: 523 WDVKNQAQNPYW 558
           W+V +  + PYW
Sbjct: 829 WEVMSYGERPYW 840


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +3

Query: 492 HGQRLSKFEVMGCEEPSTEPLLGYDY 569
           HG  L+++E++   +       GY Y
Sbjct: 393 HGDGLARYEILNFRKSEHNGTNGYQY 418


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +3

Query: 492 HGQRLSKFEVMGCEEPSTEPLLGYDY 569
           HG  L+++E++   +       GY Y
Sbjct: 483 HGDGLARYEILNFRKSEHNGTNGYQY 508


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,321
Number of Sequences: 438
Number of extensions: 3866
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)