Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1021
         (628 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60890.1 68418.m07638 receptor-like protein kinase (ATR1) (MY...    31   0.47 
At5g47510.1 68418.m05866 SEC14 cytosolic factor family protein /...    31   0.83 
At5g38810.1 68418.m04693 F-box family protein predicted proteins...    28   4.4  
At5g23310.1 68418.m02727 superoxide dismutase [Fe] / iron supero...    28   5.8  
At1g49740.1 68414.m05578 expressed protein similar to MAP3K-like...    27   7.7  

>At5g60890.1 68418.m07638 receptor-like protein kinase (ATR1)
           (MYB34) identical to receptor-like protein kinase(ATR1)
           GI:3150037 from [Arabidopsis thaliana]; contains PFAM
           profile: myb DNA binding domain PF00249; identical to
           cDNA putative transcription factor (MYB34) mRNA, partial
           cds GI:3941443
          Length = 295

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 253 EPDTILKIHVRMIMMWESDATKQVGR-ESDLASYQNALIYNMLQLRNLD 396
           E DTI+K+H      W + AT   GR ++++ +Y N  +   L+ + +D
Sbjct: 74  EDDTIIKLHALKGNKWAAIATSLAGRTDNEIKNYWNTNLKKRLKQKGID 122


>At5g47510.1 68418.m05866 SEC14 cytosolic factor family protein /
           phosphoglyceride transfer family protein similar to
           phosphatidylinositol transfer-like protein IV
           (GI:14486707) [Lotus japonicus], SEC14 cytosolic factor
           (Phosphatidylinositol/phosphatidylcholine transfer
           protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis]
           and to SEC14 cytosolic factor (SP:P53989) [Candida
           glabrata]
          Length = 376

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = -3

Query: 326 PTCFVASDSHIIIMRT*IFKMVSGSALHFVISLSNSVHSTFDKIMSSVIPATGISLGSKN 147
           P C +ASD H+    T     VSG  +      + S+     KI S+  P T   L   N
Sbjct: 153 PACSIASDKHVSSTTT--ILDVSGVGMSNFSKPARSLFMEIQKIDSNYYPETLHRLFVVN 210

Query: 146 QSSGFK 129
            SSGF+
Sbjct: 211 ASSGFR 216


>At5g38810.1 68418.m04693 F-box family protein predicted proteins,
           Arabidopsis thaliana
          Length = 259

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 312 YETSWAGIRFSVISERSDLQYVTIEKSGLLDYSS-NLFKPALQIDFARH 455
           Y   +  +  +  S R  L +  ++ SGL+ YSS     P+L++DF  H
Sbjct: 42  YRQDFTELFITKSSARPRLLFAVLKASGLIFYSSPQSQNPSLEVDFHNH 90


>At5g23310.1 68418.m02727 superoxide dismutase [Fe] / iron
           superoxide dismutase 3 (FSD3) identical to iron
           superoxide dismutase 3 [Arabidopsis thaliana]
           gi|3273757|gb|AAC24834
          Length = 263

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 7   GGRNPNEGRLQVRIDDKWGTVCNYRWNIINAAL 105
           GG  P +G L+ +ID  +G+  N+R    NAAL
Sbjct: 138 GGDTPQKGVLE-QIDKDFGSFTNFREKFTNAAL 169


>At1g49740.1 68414.m05578 expressed protein similar to MAP3K-like
           protein kinase GB:CAB16796 GI:4006878 from [Arabidopsis
           thaliana]
          Length = 359

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 276 NFQNGIWFCFTFCNIIVKFSAF 211
           +FQN IW C +F      F+AF
Sbjct: 127 DFQNDIWLCHSFDGTCFNFTAF 148


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,455,532
Number of Sequences: 28952
Number of extensions: 272801
Number of successful extensions: 551
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)