Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1020
         (475 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   3.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   4.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.8  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   7.7  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 28  SYRASCACALLKRLKKGFSSYPPRKLCSPGCVIE 129
           SY  SCA  ++     G   Y   + C PG +I+
Sbjct: 583 SYHLSCAENMMFDPMSGKCEYSLGEKCRPGQIIQ 616


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = -2

Query: 285 SPAMFLPRRESARTWCARPTG*CTPRTCARSPRTRSSAPGDPP 157
           SP     ++ES +    RPTG  TP     S    + +P   P
Sbjct: 232 SPPTVNIKKESPQMQSYRPTGNITPHGSNTSSLITTPSPSASP 274


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 283  PGDVLAAARVCANLVRTADWLM 218
            PG +LA +  C + V T+D +M
Sbjct: 1033 PGAILAFSWACNDAVMTSDSIM 1054


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 6/25 (24%), Positives = 12/25 (48%)
 Frame = +3

Query: 135 PVSSPILAEGHQVRYFEFVDFERKF 209
           P +  +L   H++RY   +D    +
Sbjct: 376 PAADELLRRFHEIRYMSTIDLRSSY 400


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 134 TCLFSDPGGGSPGALLRVRGLRA 202
           T +  + GGGSPG      G  A
Sbjct: 286 TYINKEAGGGSPGPYTNATGFLA 308


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 398 TTITRQMKDKINMD 439
           TTITR   + INMD
Sbjct: 123 TTITRARFEDINMD 136


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 398 TTITRQMKDKINMD 439
           TTITR   + INMD
Sbjct: 123 TTITRARFEDINMD 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,054
Number of Sequences: 336
Number of extensions: 1644
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)