Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1020
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo mitoc... 82 2e-16
AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical ... 30 0.98
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 1.7
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 1.7
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 28 3.0
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 28 3.0
Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z93389-2|CAB07671.2| 355|Caenorhabditis elegans Hypothetical pr... 27 5.2
U64605-7|AAF98603.1| 296|Caenorhabditis elegans Lamp (lysosome-... 27 5.2
AC024824-5|AAY55896.1| 47|Caenorhabditis elegans Hypothetical ... 27 6.9
U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical pr... 27 9.1
U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical pr... 27 9.1
U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF016421-10|AAC25792.1| 473|Caenorhabditis elegans Hypothetical... 27 9.1
AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical ... 27 9.1
>U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo
mitochondrial fusion protein)related protein 1 protein.
Length = 774
Score = 81.8 bits (193), Expect = 2e-16
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +3
Query: 3 QHANRCVDFLSRELRVCSPKEAEERIFFISAKEALLTRMRDREKPVSSPILAEGHQVRYF 182
QH R FL EL VCS +E +RIFF+S++E L +R++ R V AEGH R
Sbjct: 288 QHLTRFRQFLVDELEVCSEREVNDRIFFVSSREVLESRLKARGL-VQKAYQAEGHGTRAL 346
Query: 183 EFVDFERKFEECISQSAVRTKF-AQTRAA 266
EF +FER FE CIS+SA+ TKF A R A
Sbjct: 347 EFQNFERHFEHCISRSAIHTKFEAHNRRA 375
>AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical
protein F43C11.8 protein.
Length = 338
Score = 29.9 bits (64), Expect = 0.98
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 27 FLSRELRVCSPKEAEERIFFISAKEALLTRMRDREKPVSSPILAEGHQVRYFEFVDFE 200
F V + K+ ++ + A E TR +++ P+ SP HQ + EFV E
Sbjct: 64 FCREATNVSTVKDLQKNFALLQAVEHAKTRTEEKD-PIDSPPKCASHQYNFAEFVCIE 120
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/95 (22%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +2
Query: 182 RVRGLRAQVRGVHQPVGRAHQVRADSR-RGKNIAGDVMAALDRVYNIATEQKAAKVEKQR 358
++R L+ ++R + + + ++ R + + K + D+ AA ++ N+A + AK+
Sbjct: 990 QIRALQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQ--NLAANKLKAKL---- 1043
Query: 359 ILHEQLSSIEEQLTTITRQMKDKINMDG*ERGAQG 463
+ S+E+ T+ R+ +++ +MD +R A+G
Sbjct: 1044 -----MQSLEDSEQTMEREKRNRADMDKNKRKAEG 1073
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/95 (22%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +2
Query: 182 RVRGLRAQVRGVHQPVGRAHQVRADSR-RGKNIAGDVMAALDRVYNIATEQKAAKVEKQR 358
++R L+ ++R + + + ++ R + + K + D+ AA ++ N+A + AK+
Sbjct: 990 QIRALQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQ--NLAANKLKAKL---- 1043
Query: 359 ILHEQLSSIEEQLTTITRQMKDKINMDG*ERGAQG 463
+ S+E+ T+ R+ +++ +MD +R A+G
Sbjct: 1044 -----MQSLEDSEQTMEREKRNRADMDKNKRKAEG 1073
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/95 (22%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +2
Query: 182 RVRGLRAQVRGVHQPVGRAHQVRADSR-RGKNIAGDVMAALDRVYNIATEQKAAKVEKQR 358
++R L+ ++R + + + ++ R + + K + D+ AA ++ N+A + AK+
Sbjct: 990 QIRALQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQ--NLAANKLKAKL---- 1043
Query: 359 ILHEQLSSIEEQLTTITRQMKDKINMDG*ERGAQG 463
+ S+E+ T+ R+ +++ +MD +R A+G
Sbjct: 1044 -----MQSLEDSEQTMEREKRNRADMDKNKRKAEG 1073
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 299 LDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQMKD 424
+ +Y A EQK A + + LH++L +E L R++ +
Sbjct: 411 MKHLYEKAVEQKEALARENKKLHDELHEAKEALADANRKLHE 452
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 299 LDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQMKD 424
+ +Y A EQK A + + LH++L +E L R++ +
Sbjct: 411 MKHLYEKAVEQKEALARENKKLHDELHEAKEALADANRKLHE 452
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 299 LDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQMKD 424
+ +Y A EQK A + + LH++L +E L R++ +
Sbjct: 427 MKHLYEKAVEQKEALARENKKLHDELHEAKEALADANRKLHE 468
>Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical
protein R06C1.3 protein.
Length = 468
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -2
Query: 288 TSPAMF--LPRRESARTWCARPTG*CTPRTCARSPRTRSSAPGDPPPGS 148
T+P+ F L ++E+ + RP +P ++SP+ R PG P G+
Sbjct: 153 TNPSFFFDLWKKETLKEVAERPRRVKSPNDGSKSPKKRRKQPGQGPLGT 201
>Z93389-2|CAB07671.2| 355|Caenorhabditis elegans Hypothetical
protein T13F3.3 protein.
Length = 355
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 6 HANRCVDFLSRELRVCSPKEAEERIFFISAKEAL 107
H ++FLSR L + K +E+I FIS A+
Sbjct: 205 HGWTVLEFLSRSLEIFGNKVIDEKIVFISDNTAI 238
>U64605-7|AAF98603.1| 296|Caenorhabditis elegans Lamp
(lysosome-associated membraneprotein) homolog protein 2
protein.
Length = 296
Score = 27.5 bits (58), Expect = 5.2
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 239 HQVRADSRRGKNIAGDVMAALDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQM 418
+ + D +I G + A++ Y +EQK A + + ++ I+ +LTTI M
Sbjct: 156 YYLHVDPNDLSDIGGSIFASVGHSYYCPSEQKYAINDNDNDKYGPMAYIKFKLTTIQAFM 215
Query: 419 KD 424
+D
Sbjct: 216 ED 217
>AC024824-5|AAY55896.1| 47|Caenorhabditis elegans Hypothetical
protein Y55B1BR.6 protein.
Length = 47
Score = 27.1 bits (57), Expect = 6.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 317 IATEQKAAKVEKQRILHEQLSSIEEQLTTITR 412
+ T+QKA + EK++ E+L SIE Q I R
Sbjct: 7 LRTKQKAERKEKEKRHRERLRSIEMQRNQIHR 38
>U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical
protein B0416.4 protein.
Length = 218
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 290 MAALDRVYNIATEQKAAKVEKQRI--LHEQLSSIEEQLTTITRQMKDKINM 436
MA + R +A A + +K+ + L EQ+ + EEQ + +Q++D+I +
Sbjct: 1 MAPIRRSSRLAERYDAIESKKRSLKRLEEQIKAEEEQFSDKMKQLEDEIKI 51
>U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical
protein C26E6.7a protein.
Length = 633
Score = 26.6 bits (56), Expect = 9.1
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 117 MRDREKPVSSPILAEGHQVRYFEFVDFERKFE-ECISQSAVRTKFAQTRAAARTSPGTSW 293
+R EKP S P E + E + +RK E E S+ + KF R + R + T++
Sbjct: 19 VRKSEKPASKPPTPEVEDCTFSEKNNDQRKIEKETESEESSNLKFPPARPSIRNA--TNF 76
Query: 294 RLSTGCTT*QQSKKQP 341
R + K++P
Sbjct: 77 RRIICISESDSGKEEP 92
>U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical
protein C26E6.7b protein.
Length = 635
Score = 26.6 bits (56), Expect = 9.1
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 117 MRDREKPVSSPILAEGHQVRYFEFVDFERKFE-ECISQSAVRTKFAQTRAAARTSPGTSW 293
+R EKP S P E + E + +RK E E S+ + KF R + R + T++
Sbjct: 19 VRKSEKPASKPPTPEVEDCTFSEKNNDQRKIEKETESEESSNLKFPPARPSIRNA--TNF 76
Query: 294 RLSTGCTT*QQSKKQP 341
R + K++P
Sbjct: 77 RRIICISESDSGKEEP 92
>AF016421-10|AAC25792.1| 473|Caenorhabditis elegans Hypothetical
protein F44E7.7 protein.
Length = 473
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 25 TSYRASCACALLKRLKKGFSSYPPRKLCSPGCVIERNLSL 144
+S S CA K+ KKG S P R +C CV+ LS+
Sbjct: 248 SSKELSMICAE-KKPKKGKESVPYRAICFDKCVLATWLSM 286
>AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical
protein Y34D9A.1 protein.
Length = 413
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 129 EKPVSSPILAEGHQVRYFEFVDFERKFEECISQSAVRTKFAQT 257
EKPV I R E F +K E I+ SA+R F QT
Sbjct: 261 EKPVDFQIQGNSLDTRIHEISKFYKKHEATITPSAIR--FFQT 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,237,815
Number of Sequences: 27780
Number of extensions: 167502
Number of successful extensions: 830
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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