Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1018
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.    23   6.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.1  

>AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 316 THSTQSHIWSSRLTKCMHRFVPPYIFQK 399
           TH   SH++ +   +  H  +PP +F++
Sbjct: 115 THPGVSHMFQAAAFRFGHSLIPPGLFRR 142


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 250  CLVANKTMDQDYACPKCYHVGKNV 179
            C++A K    D   P CY+V K +
Sbjct: 1738 CMIAAKFEPHDNWLPPCYYVPKEL 1761


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 501  FSWTRELLWHNLIELFGTGISLFNIIG 421
            + W++   W+ L     TG SLFN +G
Sbjct: 2785 WDWSQPGTWNALFIGSLTGASLFNAVG 2811


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,910
Number of Sequences: 2352
Number of extensions: 14045
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)