Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1018
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000661-1|AAH00661.1| 305|Homo sapiens peroxisomal membrane pr... 58 2e-08
M86852-1|AAC12785.1| 305|Homo sapiens peroxisome assembly facto... 56 9e-08
M85038-1|AAA60141.1| 305|Homo sapiens peroxisomal membrane prot... 56 9e-08
BC093043-1|AAH93043.1| 305|Homo sapiens peroxisomal membrane pr... 56 9e-08
BC005375-1|AAH05375.1| 305|Homo sapiens peroxisomal membrane pr... 56 9e-08
AF133826-1|AAF97687.1| 305|Homo sapiens 35 kDa peroxisomal memb... 56 9e-08
BC003054-1|AAH03054.1| 450|Homo sapiens bifunctional apoptosis ... 32 1.7
AF173003-1|AAF59975.1| 450|Homo sapiens apoptosis regulator pro... 32 1.7
CR533514-1|CAG38545.1| 358|Homo sapiens RNF146 protein. 31 5.1
BC008235-1|AAH08235.1| 358|Homo sapiens ring finger protein 146... 31 5.1
AL109939-2|CAB76255.1| 358|Homo sapiens RP3-351K20.1 protein. 31 5.1
AL109939-1|CAB76254.1| 359|Homo sapiens RP3-351K20.1 protein. 31 5.1
AK027776-1|BAB55359.1| 358|Homo sapiens protein ( Homo sapiens ... 31 5.1
AK027558-1|BAB55196.1| 359|Homo sapiens protein ( Homo sapiens ... 31 5.1
AK027436-1|BAB55108.1| 358|Homo sapiens protein ( Homo sapiens ... 31 5.1
AJ315122-1|CAC85986.1| 358|Homo sapiens dactylidin protein. 31 5.1
>BC000661-1|AAH00661.1| 305|Homo sapiens peroxisomal membrane
protein 3, 35kDa (Zellweger syndrome) protein.
Length = 305
Score = 58.4 bits (135), Expect = 2e-08
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = -1
Query: 489 RELLWHNLIELFGTGISLFNIIGLKQRLSKFLKYVWWNKPVHTFSQPGAPNM--TLSTV- 319
RELLWH E + L N+ LK +LS W P+ GAPN TL+T
Sbjct: 193 RELLWHGFAEFLIFLLPLINVQKLKAKLSS------WCIPL-----TGAPNSDNTLATSG 241
Query: 318 --CACCSNKPVLPHTMGCSHIFCF 253
CA C +P +PHT+GC HIFC+
Sbjct: 242 KECALCGERPTMPHTIGCEHIFCY 265
>M86852-1|AAC12785.1| 305|Homo sapiens peroxisome assembly factor-1
protein.
Length = 305
Score = 56.4 bits (130), Expect = 9e-08
Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = -1
Query: 489 RELLWHNLIELFGTGISLFNIIGLKQRLSKFLKYVWWNKPVHTFSQPGAPNM--TLSTV- 319
RELLWH E + L N+ LK +LS W P+ GAPN TL+T
Sbjct: 193 RELLWHGFAEFLIFLLPLINVQKLKAKLSS------WCIPL-----TGAPNSDNTLATSG 241
Query: 318 --CACCSNKPVLPHTMGCSHIFCF 253
CA C P +PHT+GC HIFC+
Sbjct: 242 KECALCGEWPTMPHTIGCEHIFCY 265
>M85038-1|AAA60141.1| 305|Homo sapiens peroxisomal membrane protein
protein.
Length = 305
Score = 56.4 bits (130), Expect = 9e-08
Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = -1
Query: 489 RELLWHNLIELFGTGISLFNIIGLKQRLSKFLKYVWWNKPVHTFSQPGAPNM--TLSTV- 319
RELLWH E + L N+ LK +LS W P+ GAPN TL+T
Sbjct: 193 RELLWHGFAEFLIFLLPLINVQKLKAKLSS------WCIPL-----TGAPNSDNTLATSG 241
Query: 318 --CACCSNKPVLPHTMGCSHIFCF 253
CA C P +PHT+GC HIFC+
Sbjct: 242 KECALCGEWPTMPHTIGCEHIFCY 265
>BC093043-1|AAH93043.1| 305|Homo sapiens peroxisomal membrane
protein 3, 35kDa (Zellweger syndrome) protein.
Length = 305
Score = 56.4 bits (130), Expect = 9e-08
Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = -1
Query: 489 RELLWHNLIELFGTGISLFNIIGLKQRLSKFLKYVWWNKPVHTFSQPGAPNM--TLSTV- 319
RELLWH E + L N+ LK +LS W P+ GAPN TL+T
Sbjct: 193 RELLWHGFAEFLIFLLPLINVQKLKAKLSS------WCIPL-----TGAPNSDNTLATSG 241
Query: 318 --CACCSNKPVLPHTMGCSHIFCF 253
CA C P +PHT+GC HIFC+
Sbjct: 242 KECALCGEWPTMPHTIGCEHIFCY 265
>BC005375-1|AAH05375.1| 305|Homo sapiens peroxisomal membrane
protein 3, 35kDa (Zellweger syndrome) protein.
Length = 305
Score = 56.4 bits (130), Expect = 9e-08
Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = -1
Query: 489 RELLWHNLIELFGTGISLFNIIGLKQRLSKFLKYVWWNKPVHTFSQPGAPNM--TLSTV- 319
RELLWH E + L N+ LK +LS W P+ GAPN TL+T
Sbjct: 193 RELLWHGFAEFLIFLLPLINVQKLKAKLSS------WCIPL-----TGAPNSDNTLATSG 241
Query: 318 --CACCSNKPVLPHTMGCSHIFCF 253
CA C P +PHT+GC HIFC+
Sbjct: 242 KECALCGEWPTMPHTIGCEHIFCY 265
>AF133826-1|AAF97687.1| 305|Homo sapiens 35 kDa peroxisomal
membrane protein protein.
Length = 305
Score = 56.4 bits (130), Expect = 9e-08
Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = -1
Query: 489 RELLWHNLIELFGTGISLFNIIGLKQRLSKFLKYVWWNKPVHTFSQPGAPNM--TLSTV- 319
RELLWH E + L N+ LK +LS W P+ GAPN TL+T
Sbjct: 193 RELLWHGFAEFLIFLLPLINVQKLKAKLSS------WCIPL-----TGAPNSDNTLATSG 241
Query: 318 --CACCSNKPVLPHTMGCSHIFCF 253
CA C P +PHT+GC HIFC+
Sbjct: 242 KECALCGEWPTMPHTIGCEHIFCY 265
>BC003054-1|AAH03054.1| 450|Homo sapiens bifunctional apoptosis
regulator protein.
Length = 450
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = -1
Query: 342 PNMTLSTV-CACCSNKPVLPHTMGCSHIF---CFTVWW 241
P +++S C CC + V P T+ C H F C +WW
Sbjct: 25 PQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLALWW 62
>AF173003-1|AAF59975.1| 450|Homo sapiens apoptosis regulator
protein.
Length = 450
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = -1
Query: 342 PNMTLSTV-CACCSNKPVLPHTMGCSHIF---CFTVWW 241
P +++S C CC + V P T+ C H F C +WW
Sbjct: 25 PQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLALWW 62
>CR533514-1|CAG38545.1| 358|Homo sapiens RNF146 protein.
Length = 358
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 345 APNMTLSTVCACCSNKPVLPHTMGCSHIFCF 253
AP++T+ CA C V P ++ C H+FC+
Sbjct: 28 APSLTVPE-CAICLQTCVHPVSLPCKHVFCY 57
>BC008235-1|AAH08235.1| 358|Homo sapiens ring finger protein 146
protein.
Length = 358
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 345 APNMTLSTVCACCSNKPVLPHTMGCSHIFCF 253
AP++T+ CA C V P ++ C H+FC+
Sbjct: 28 APSLTVPE-CAICLQTCVHPVSLPCKHVFCY 57
>AL109939-2|CAB76255.1| 358|Homo sapiens RP3-351K20.1 protein.
Length = 358
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 345 APNMTLSTVCACCSNKPVLPHTMGCSHIFCF 253
AP++T+ CA C V P ++ C H+FC+
Sbjct: 28 APSLTVPE-CAICLQTCVHPVSLPCKHVFCY 57
>AL109939-1|CAB76254.1| 359|Homo sapiens RP3-351K20.1 protein.
Length = 359
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 345 APNMTLSTVCACCSNKPVLPHTMGCSHIFCF 253
AP++T+ CA C V P ++ C H+FC+
Sbjct: 29 APSLTVPE-CAICLQTCVHPVSLPCKHVFCY 58
>AK027776-1|BAB55359.1| 358|Homo sapiens protein ( Homo sapiens
cDNA FLJ14870 fis, clone PLACE1002499. ).
Length = 358
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 345 APNMTLSTVCACCSNKPVLPHTMGCSHIFCF 253
AP++T+ CA C V P ++ C H+FC+
Sbjct: 28 APSLTVPE-CAICLQTCVHPVSLPCKHVFCY 57
>AK027558-1|BAB55196.1| 359|Homo sapiens protein ( Homo sapiens
cDNA FLJ14652 fis, clone NT2RP2002208. ).
Length = 359
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 345 APNMTLSTVCACCSNKPVLPHTMGCSHIFCF 253
AP++T+ CA C V P ++ C H+FC+
Sbjct: 29 APSLTVPE-CAICLQTCVHPVSLPCKHVFCY 58
>AK027436-1|BAB55108.1| 358|Homo sapiens protein ( Homo sapiens
cDNA FLJ14530 fis, clone NT2RM2000101. ).
Length = 358
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 345 APNMTLSTVCACCSNKPVLPHTMGCSHIFCF 253
AP++T+ CA C V P ++ C H+FC+
Sbjct: 28 APSLTVPE-CAICLQTCVHPVSLPCKHVFCY 57
>AJ315122-1|CAC85986.1| 358|Homo sapiens dactylidin protein.
Length = 358
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 345 APNMTLSTVCACCSNKPVLPHTMGCSHIFCF 253
AP++T+ CA C V P ++ C H+FC+
Sbjct: 28 APSLTVPE-CAICLQTCVHPVSLPCKHVFCY 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,519,062
Number of Sequences: 237096
Number of extensions: 1940911
Number of successful extensions: 3587
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3581
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -