Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1016
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22555-1|CAA80277.1|  509|Homo sapiens CLA-1 protein.                  33   0.89 
BC112037-1|AAI12038.1|  509|Homo sapiens scavenger receptor clas...    32   2.1  
BC093732-1|AAH93732.1|  509|Homo sapiens scavenger receptor clas...    32   2.1  
BC080647-1|AAH80647.1|  509|Homo sapiens scavenger receptor clas...    32   2.1  
AF515445-1|AAQ08185.1|  474|Homo sapiens scavenger receptor clas...    32   2.1  
AB209436-1|BAD92673.1|  581|Homo sapiens Scavenger receptor clas...    32   2.1  

>Z22555-1|CAA80277.1|  509|Homo sapiens CLA-1 protein.
          Length = 509

 Score = 33.1 bits (72), Expect = 0.89
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 382 YREDMEKVNIKFHDNDTLTYQHNKILRFVPEMSVDKKLKLVVL 510
           YRE   K NI F++NDT+++   +  +F P  S   +   +V+
Sbjct: 94  YRESRHKSNITFNNNDTVSFLEYRTFQFQPSKSHGSESDYIVM 136


>BC112037-1|AAI12038.1|  509|Homo sapiens scavenger receptor class
           B, member 1 protein.
          Length = 509

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 382 YREDMEKVNIKFHDNDTLTYQHNKILRFVPEMSVDKKLKLVVL 510
           YRE   K NI F++NDT+++   +  +F P  S   +   +V+
Sbjct: 94  YREFRHKSNITFNNNDTVSFLEYRTFQFQPSKSHGSESDYIVM 136


>BC093732-1|AAH93732.1|  509|Homo sapiens scavenger receptor class
           B, member 1 protein.
          Length = 509

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 382 YREDMEKVNIKFHDNDTLTYQHNKILRFVPEMSVDKKLKLVVL 510
           YRE   K NI F++NDT+++   +  +F P  S   +   +V+
Sbjct: 94  YREFRHKSNITFNNNDTVSFLEYRTFQFQPSKSHGSESDYIVM 136


>BC080647-1|AAH80647.1|  509|Homo sapiens scavenger receptor class
           B, member 1 protein.
          Length = 509

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 382 YREDMEKVNIKFHDNDTLTYQHNKILRFVPEMSVDKKLKLVVL 510
           YRE   K NI F++NDT+++   +  +F P  S   +   +V+
Sbjct: 94  YREFRHKSNITFNNNDTVSFLEYRTFQFQPSKSHGSESDYIVM 136


>AF515445-1|AAQ08185.1|  474|Homo sapiens scavenger receptor class B
           type III protein.
          Length = 474

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 382 YREDMEKVNIKFHDNDTLTYQHNKILRFVPEMSVDKKLKLVVL 510
           YRE   K NI F++NDT+++   +  +F P  S   +   +V+
Sbjct: 59  YREFRHKSNITFNNNDTVSFLEYRTFQFQPSKSHGSESDYIVM 101


>AB209436-1|BAD92673.1|  581|Homo sapiens Scavenger receptor class B
           member 1 variant protein.
          Length = 581

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 382 YREDMEKVNIKFHDNDTLTYQHNKILRFVPEMSVDKKLKLVVL 510
           YRE   K NI F++NDT+++   +  +F P  S   +   +V+
Sbjct: 122 YREFRHKSNITFNNNDTVSFLEYRTFQFQPSKSHGSESDYIVM 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,501,867
Number of Sequences: 237096
Number of extensions: 1621930
Number of successful extensions: 3043
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3043
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)