Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1015
         (728 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K8R5 Cluster: Putative uncharacterized protein; n=3; ...    33   5.4  
UniRef50_A0CX97 Cluster: Chromosome undetermined scaffold_3, who...    33   7.2  

>UniRef50_A5K8R5 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 2235

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
 Frame = +1

Query: 124 WNTFIYLLLKKNICLLIWLENIFMVFN*KTTD----FLFNSSH*GNESQVNYFSDLNNK* 291
           ++TF Y L    +CLL +L+N++   N KT +    FLF          +NYFS L    
Sbjct: 242 FDTFQYFL--NLLCLLYFLKNVYFDLNYKTNENSYSFLFKGFEERKNKVINYFSFLKKIR 299

Query: 292 L-KDTQNPVF*ISIKILSTLFSLTKYIN 372
           L K   N V    +KI    F  T YIN
Sbjct: 300 LDKLLDNEV----VKIFCNFFQYT-YIN 322


>UniRef50_A0CX97 Cluster: Chromosome undetermined scaffold_3, whole
            genome shotgun sequence; n=2; Oligohymenophorea|Rep:
            Chromosome undetermined scaffold_3, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2724

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +1

Query: 502  DQSIQKLLILKYYHPLVRYIAHFGRSFRTKCLYLNKYNGXXXXXXXXXLDLCLVLSIFIK 681
            +QSIQ LL  ++Y    + +  +G+  R   +YL++Y+            + L+L  F+ 
Sbjct: 2350 EQSIQLLLFFQFYRLSQQQLIFYGQQLRLILIYLSEYSQILLVFSKVISVMMLILYQFVI 2409

Query: 682  KLVGS 696
             L+GS
Sbjct: 2410 ILLGS 2414


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,052,083
Number of Sequences: 1657284
Number of extensions: 12669506
Number of successful extensions: 21024
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21016
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)