Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1014
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p... 36 0.023
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ... 36 0.023
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ... 36 0.023
Z81553-5|CAB04494.1| 382|Caenorhabditis elegans Hypothetical pr... 29 2.6
AM231685-1|CAJ77754.1| 375|Caenorhabditis elegans GDP-mannose 4... 29 2.6
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 28 4.6
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 415 TLRCSTSISGRLPGNCVAGHQKHRDPATGRRIKTVADVEASAKAVEGPAELEVGKVEGNT 594
T R STS S +P + ++H A +R ++ E SA+ E P E+EV +V G
Sbjct: 24 TTRFSTSFSPSIPCHRQENFRRHSTSALAKR--NGSESEKSAEIRENPDEIEVSRVSGRD 81
Query: 595 DSVA 606
S+A
Sbjct: 82 SSLA 85
>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 415 TLRCSTSISGRLPGNCVAGHQKHRDPATGRRIKTVADVEASAKAVEGPAELEVGKVEGNT 594
T R STS S +P + ++H A +R ++ E SA+ E P E+EV +V G
Sbjct: 24 TTRFSTSFSPSIPCHRQENFRRHSTSALAKR--NGSESEKSAEIRENPDEIEVSRVSGRD 81
Query: 595 DSVA 606
S+A
Sbjct: 82 SSLA 85
>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 415 TLRCSTSISGRLPGNCVAGHQKHRDPATGRRIKTVADVEASAKAVEGPAELEVGKVEGNT 594
T R STS S +P + ++H A +R ++ E SA+ E P E+EV +V G
Sbjct: 24 TTRFSTSFSPSIPCHRQENFRRHSTSALAKR--NGSESEKSAEIRENPDEIEVSRVSGRD 81
Query: 595 DSVA 606
S+A
Sbjct: 82 SSLA 85
>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 415 TLRCSTSISGRLPGNCVAGHQKHRDPATGRRIKTVADVEASAKAVEGPAELEVGKVEGNT 594
T R STS S +P + ++H A +R ++ E SA+ E P E+EV +V G
Sbjct: 24 TTRFSTSFSPSIPCHRQENFRRHSTSALAKR--NGSESEKSAEIRENPDEIEVSRVSGRD 81
Query: 595 DSVA 606
S+A
Sbjct: 82 SSLA 85
>Z81553-5|CAB04494.1| 382|Caenorhabditis elegans Hypothetical
protein F56H6.5 protein.
Length = 382
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 135 LQVIEWGQQLGWPQRGTPRLGMAPDGKVRLQRRPVRRKQSEISS 4
L E G+QL W G +G DG VR++ P + +E+ +
Sbjct: 298 LAFAEIGEQLVWEGEGVDEVGKNQDGVVRVKVSPKYYRPTEVET 341
>AM231685-1|CAJ77754.1| 375|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 375
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 135 LQVIEWGQQLGWPQRGTPRLGMAPDGKVRLQRRPVRRKQSEISS 4
L E G+QL W G +G DG VR++ P + +E+ +
Sbjct: 291 LAFAEIGEQLVWEGEGVDEVGKNQDGVVRVKVSPKYYRPTEVET 334
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +1
Query: 28 PYWPALQPHLPIWCHSQ-PWRTTLW-PSQLLSPLYHLET----FRLQRSTPRSKPLIS 183
PY A++P+LPIW + P W P + ++ LE L TP+S+ LIS
Sbjct: 149 PYVVAVEPNLPIWSIIETPVAAIDWDPEESYRLMFWLEDSHKGIDLVEETPKSRELIS 206
>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical
protein C36B1.8b protein.
Length = 1052
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 476 KSIATQPPVEESRPSRT*KPALKP*RAPLNWKS 574
K + T PPVEE++ + KP +K P+ +KS
Sbjct: 284 KIVQTDPPVEEAKKKKE-KPKIKRDEEPMPYKS 315
>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical
protein C36B1.8a protein.
Length = 1049
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 476 KSIATQPPVEESRPSRT*KPALKP*RAPLNWKS 574
K + T PPVEE++ + KP +K P+ +KS
Sbjct: 284 KIVQTDPPVEEAKKKKE-KPKIKRDEEPMPYKS 315
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.5 bits (58), Expect = 8.0
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 22 FPPYWPALQPHLPIW 66
FPP+WP P P W
Sbjct: 435 FPPFWPPCPPPPPFW 449
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,824,470
Number of Sequences: 27780
Number of extensions: 245517
Number of successful extensions: 767
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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