Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1013
         (705 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3060|AAF50875.1|  223|Drosophila melanogaster CG11229-P...    30   3.5  
AE014297-2326|AAF55397.1|  643|Drosophila melanogaster CG5265-PA...    29   6.2  
AE013599-2558|AAF57792.2|  134|Drosophila melanogaster CG14488-P...    29   6.2  
AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA...    29   8.1  
AE014134-2884|ABI31322.1| 1839|Drosophila melanogaster CG7527-PB...    29   8.1  

>AE014298-3060|AAF50875.1|  223|Drosophila melanogaster CG11229-PA
           protein.
          Length = 223

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 421 VNCNTTHYRANWVPGPPSSIV 359
           VN + T  R+ W PGPP+SI+
Sbjct: 192 VNASATASRSFWFPGPPASII 212


>AE014297-2326|AAF55397.1|  643|Drosophila melanogaster CG5265-PA
           protein.
          Length = 643

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = -2

Query: 551 LLGRAIGAGLFAITQLAKGGCAARRLSWVTPGFSQSRRCKTTASEL--*YDSL*GELGTG 378
           LLG+ +   LF +  +A   C      + +PG+ +S   + + S++   YD+    +G G
Sbjct: 519 LLGKGVDRHLFGLKLMAVENCLPVPEFFSSPGYVKSTHFRMSTSQVATKYDAF---MGYG 575

Query: 377 PPLEYSYNGC 348
           P +E  Y  C
Sbjct: 576 PSVEDGYACC 585


>AE013599-2558|AAF57792.2|  134|Drosophila melanogaster CG14488-PA
           protein.
          Length = 134

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = -2

Query: 350 CPTLQTETHYCFTAEISRVVVPTRADSQEVLPQYKIYISYGRKPELRNGIKDSQ*YSFDK 171
           C T  TE+   F     + V+PTRA+  E     +++  Y R+   +  + + +   +D+
Sbjct: 15  CSTELTESQASFAPPKIKKVLPTRANRMEQFLWQELFAEYNRQASAQVDLGEDRTEYYDQ 74

Query: 170 F 168
           F
Sbjct: 75  F 75


>AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA,
            isoform A protein.
          Length = 1912

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 298  GW-WYPPAQTHKRSYHSIKYIYRMGVNL 218
            GW WYPP Q  + S+ S+++I R+   L
Sbjct: 1133 GWAWYPPLQLCQESHLSLEFITRVADGL 1160


>AE014134-2884|ABI31322.1| 1839|Drosophila melanogaster CG7527-PB,
            isoform B protein.
          Length = 1839

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 298  GW-WYPPAQTHKRSYHSIKYIYRMGVNL 218
            GW WYPP Q  + S+ S+++I R+   L
Sbjct: 1060 GWAWYPPLQLCQESHLSLEFITRVADGL 1087


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,146,114
Number of Sequences: 53049
Number of extensions: 806519
Number of successful extensions: 2058
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2058
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)