Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1011
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.6  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   6.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 80   DECDFNVIFDIPSLSNMYVCVPLYVV 3
            D+CD    +   S S+ YVCV  ++V
Sbjct: 1205 DKCDSGQYYPHESCSSFYVCVNGHLV 1230


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 106 ITEEYIRCLLQR 141
           +TE Y+ CLL++
Sbjct: 41  LTENYVNCLLEK 52


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3

Query: 474 RVKSDNNKNELKYLVLIKIEFCSKT 548
           +VKS  NK   +   L KIEFC  T
Sbjct: 232 KVKSILNKKCCEKCGLKKIEFCRPT 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,497
Number of Sequences: 336
Number of extensions: 2263
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)