Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1007
(600 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 184 4e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 184 4e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 2e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 93 2e-19
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 76 3e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 66 2e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 53 2e-07
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 46 2e-05
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 35 0.058
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 34 0.076
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 34 0.076
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 34 0.076
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 34 0.10
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 32 0.31
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 32 0.41
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 32 0.41
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 32 0.41
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 32 0.41
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 32 0.41
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 32 0.41
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.54
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 31 0.94
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.94
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 1.6
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 30 1.6
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 1.6
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.6
SB_35603| Best HMM Match : DUF1309 (HMM E-Value=0.51) 29 2.2
SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 28 5.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_7076| Best HMM Match : IncA (HMM E-Value=0.74) 28 5.0
SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 6.6
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 28 6.6
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 27 8.8
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 27 8.8
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.8
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 27 8.8
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 27 8.8
SB_52484| Best HMM Match : AbfB (HMM E-Value=0.011) 27 8.8
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.8
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYA 145
Score = 127 bits (306), Expect = 8e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIV+DSGDGV+HTVPIY
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIY 167
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYA 144
Score = 124 bits (299), Expect = 6e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIV+DSGDGV+HTVPIY
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIY 166
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYA 144
Score = 125 bits (302), Expect = 2e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIV+DSGDGV+HTVPIY
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIY 166
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYA 145
Score = 131 bits (317), Expect = 4e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIV+DSGDGV+HTVPIY
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIY 167
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYA 145
Score = 127 bits (306), Expect = 8e-30
Identities = 56/62 (90%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIV+DSGDGVSHTVPIY
Sbjct: 146 SGRTTGIVMDSGDGVSHTVPIY 167
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 125 bits (302), Expect = 2e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 347
SKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 420 NREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
N + M +IMFETFN+PAMYVAIQAVLSLYA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYA 107
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIV+DSGDGV+HTVPIY
Sbjct: 108 SGRTTGIVMDSGDGVTHTVPIY 129
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/84 (51%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 437
R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM
Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMI 124
Query: 438 QIMFETFNTPAMYVAIQAVLSLYA 509
++MFE + +Y+AIQAVL+LYA
Sbjct: 125 EVMFENYQFEGVYIAIQAVLTLYA 148
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +1
Query: 94 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 252
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
Score = 35.9 bits (79), Expect = 0.025
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 512 GRTTGIVLDSGDGVSHTVPIY 574
G TG+V+DSGDGV+H P+Y
Sbjct: 150 GLLTGVVIDSGDGVTHICPVY 170
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = +3
Query: 327 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 506
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 507 A 509
A
Sbjct: 2189 A 2189
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 201
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTG V D GDGVSHTVP+Y
Sbjct: 2190 SGRTTGTVFDCGDGVSHTVPVY 2211
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 75.8 bits (178), Expect = 3e-14
Identities = 31/45 (68%), Positives = 40/45 (88%)
Frame = +3
Query: 375 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYA 170
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
+GRTTG+VLD+GDGVSH+VPIY
Sbjct: 171 TGRTTGVVLDAGDGVSHSVPIY 192
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/75 (36%), Positives = 48/75 (64%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 464
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 465 PAMYVAIQAVLSLYA 509
PA ++ +VL+ +A
Sbjct: 63 PAFFLCKNSVLTAFA 77
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 201
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +1
Query: 70 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 240
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 241 GDEAQAK 261
GD A AK
Sbjct: 753 GDAAVAK 759
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTG+V DSGDGVSH VPIY
Sbjct: 24 SGRTTGVVFDSGDGVSHNVPIY 45
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 441 IMFETFNTPAMYVAIQAVLSLYA 509
IMFE FN+PA+YVAIQAVLSLYA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYA 23
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 279 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 392
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 521 TGIVLDSGDGVSHTVPI 571
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 198 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 82
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 34.7 bits (76), Expect = 0.058
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 33.9 bits (74), Expect = 0.10
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +3
Query: 351 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAPVVP--P 524
N L++ PE + VL + LN AN + A V A S +P VP P
Sbjct: 157 NTLKITPENY-VLTNKQTLNLIANNALLVNTASPHTAHRAFIVTTCASTSTESPAVPVKP 215
Query: 525 VSCWTPATVSPTPCPSTEGYRHSPY 599
S T A +PTP P T SP+
Sbjct: 216 ASTPTFAKNAPTPIPLTSVAPESPH 240
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 521 TGIVLDSGDGVSHTVPI 571
TG V+DSGDGV+H +P+
Sbjct: 62 TGCVIDSGDGVTHVIPV 78
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L CLC + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 276 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 428
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 30.7 bits (66), Expect = 0.94
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = +3
Query: 381 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSP- 557
PVL A P A + TQ + P ++ V + AP PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPP 81
Query: 558 --TPCPST 575
T P+T
Sbjct: 82 VVTDAPTT 89
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 445 CSKHSTRPPCTSPSKPCSRCTLRSYHRYRAG 537
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 401 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 493
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 168 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 341
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 342 TFYN 353
T N
Sbjct: 497 TCPN 500
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 359 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRSGRTTGIVLD 538
ACR R P P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 539 SGDGVSHTVPI 571
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Frame = +3
Query: 354 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAPVVP 521
E APE V T AP + P+ +T + ET PA A++ +L +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 522 PVSCWTPATVSP--TPCPST 575
+ + TV+P T P+T
Sbjct: 1383 ETTASSETTVAPETTDAPAT 1402
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYNE 356
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 88 EVAALVVDNGSGMCKAGFAGDDAPRAV 168
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_35603| Best HMM Match : DUF1309 (HMM E-Value=0.51)
Length = 78
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 558 WETPSPESSTIPVVRPERTARA-RLGWRRTWRA 463
WET +P + P +PE+ + R+ W++ W A
Sbjct: 32 WETQAPAYTMRPKTQPEKDSGGDRVAWKKQWMA 64
>SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 558 WETPSPESSTIPVVRPERTARA-RLGWRRTWRA 463
WET +P + P +PE+ + R+ W++ W A
Sbjct: 58 WETQAPAYTMRPKTQPEKDSGGDRVAWKKQWMA 90
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 348 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAPV 515
Y +L V +PV T+ + + N + TQ+M T P Y + V + Y PV
Sbjct: 116 YTQLMVFTRYNPVRYTQLMVFTRYNHVRYTQLMVFTRYNPVRYAQLM-VFTRYNPV 170
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +3
Query: 399 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSPTPCPS 572
A P A + + +NTP ++ + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQA--PPTLPPTTLTTPSWSQPVPVPS 943
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 459 NTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSPTPCPST 575
N P M A++ L Y P PP P V+P P P T
Sbjct: 106 NYPLMN-AVKKYLGGYVPPPPPTGTLPPPPVTPPPGPET 143
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_7076| Best HMM Match : IncA (HMM E-Value=0.74)
Length = 282
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +2
Query: 365 RPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVR------SGRTTG 526
R R P PA+ ++R P I H R VR+ RA AV SG G
Sbjct: 82 RGRRCPPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGVAAG 141
Query: 527 IVLDSGDGVS 556
++ +G GVS
Sbjct: 142 VLSSAGLGVS 151
>SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 328 FSMSSQLVTIPCSMGYLRVRIPLLLVPHLLHKSPSVP 218
F +S LVT S + + P LLVPH L K S+P
Sbjct: 571 FEISPPLVT---SSSHSLTQSPTLLVPHRLKKKESIP 604
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = -1
Query: 264 LFCLCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 100
+F CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 99 RGNFFVAHLE 70
G V L+
Sbjct: 520 HGQVDVLLLD 529
>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
Length = 481
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +3
Query: 450 ETFNTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSPTPCPSTE 578
+ + P + +Q +++ P + P +C TP +SP TE
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTE 330
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 94
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 93 NFFVAHLE 70
V L+
Sbjct: 152 QVDVLLLD 159
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Frame = +3
Query: 354 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAPVVP 521
E VAPE L E P+ + +T P VAI++ L+L + V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 522 PVSCWTPATVSPTPCPSTE 578
+ T TV+P + E
Sbjct: 79 ETTVATETTVAPETTAAPE 97
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +3
Query: 342 TFYNELRVAPE----EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
T +E VAP+ L E + P+ + + ET P VA + +
Sbjct: 487 TVASETTVAPKTTAASEATLAPETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDT 546
Query: 510 PVVPPVSCWTPATVSP--TPCPST 575
P+VP + +TV+P T P T
Sbjct: 547 PIVPETTVALESTVAPEITVVPET 570
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 94
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 93 NFFVAHLE 70
V L+
Sbjct: 152 QVDVLLLD 159
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 188 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 78
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 94
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 93 NFFVAHLE 70
V L+
Sbjct: 185 QVDVLLLD 192
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 94
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 93 NFFVAHLE 70
V L+
Sbjct: 102 QVDVLLLD 109
>SB_52484| Best HMM Match : AbfB (HMM E-Value=0.011)
Length = 782
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = -3
Query: 565 HGVGDTVAGVQHDTGGTTGAYSE-----STAWMATYMAGVLNVSNMIWVI-FSLLALGLR 404
+GV T H TGG+TGA S +T W A+ + S A G
Sbjct: 198 NGVTSTQTVASHTTGGSTGAPSSGAMVGATTWSASSAGASAGGGGGVGTTGGSTGAAGGG 257
Query: 403 GASVSRTGCSSGATRSSL 350
G S + SSG+T +S+
Sbjct: 258 GGGTSTSTGSSGSTGTSM 275
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 94
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 93 NFFVAHLE 70
V L+
Sbjct: 774 QVDVLLLD 781
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 244 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 98
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -3
Query: 250 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 80
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -1
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 94
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 93 NFFVAHLE 70
V L+
Sbjct: 858 QVDVLLLD 865
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,939,758
Number of Sequences: 59808
Number of extensions: 566714
Number of successful extensions: 2205
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2188
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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