Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1007
(600 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 3e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 4e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 4e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 1e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 182 2e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 2e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 2e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 163 1e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 156 1e-38
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 155 2e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 109 2e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 2e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 82 2e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 4e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 56 1e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 3e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.083
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 30 1.3
At5g66770.1 68418.m08416 scarecrow transcription factor family p... 29 3.1
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 3.1
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 3.1
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.1
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 29 3.1
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.1
At5g50400.1 68418.m06242 calcineurin-like phosphoesterase family... 27 7.2
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.2
At1g19350.5 68414.m02408 brassinosteroid signalling positive reg... 27 7.2
At1g19350.4 68414.m02407 brassinosteroid signalling positive reg... 27 7.2
At1g19350.3 68414.m02405 brassinosteroid signalling positive reg... 27 7.2
At1g19350.1 68414.m02406 brassinosteroid signalling positive reg... 27 7.2
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 9.5
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 9.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 3e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLYA 146
Score = 109 bits (262), Expect = 1e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIVLDSGDGVSHTVPIY
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIY 168
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLYA 146
Score = 109 bits (262), Expect = 1e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIVLDSGDGVSHTVPIY
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIY 168
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLYA 146
Score = 109 bits (262), Expect = 1e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIVLDSGDGVSHTVPIY
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIY 168
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 1e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNVPAMYVAIQAVLSLYA 146
Score = 109 bits (262), Expect = 1e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIVLDSGDGVSHTVPIY
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIY 168
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLYA 146
Score = 105 bits (251), Expect = 3e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIVLDSGDGVSHTVPIY
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIY 168
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLYA 146
Score = 105 bits (251), Expect = 3e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIVLDSGDGVSHTVPIY
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIY 168
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLYA 146
Score = 105 bits (251), Expect = 3e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIVLDSGDGVSHTVPIY
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIY 168
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNAPAMYVAIQAVLSLYA 146
Score = 109 bits (262), Expect = 1e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIVLDSGDGVSHTVPIY
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIY 168
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNAPAMYVAIQAVLSLYA 146
Score = 109 bits (262), Expect = 1e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIVLDSGDGVSHTVPIY
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIY 168
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 163 bits (395), Expect = 1e-40
Identities = 69/85 (81%), Positives = 80/85 (94%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKM
Sbjct: 63 ARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKM 122
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFE+F P+MY+ IQAVLSLY+
Sbjct: 123 TQIMFESFAFPSMYIGIQAVLSLYS 147
Score = 103 bits (248), Expect = 7e-23
Identities = 45/59 (76%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQA+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTGIVLDSGDGVSHTVPIY
Sbjct: 148 SGRTTGIVLDSGDGVSHTVPIY 169
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 156 bits (378), Expect = 1e-38
Identities = 67/85 (78%), Positives = 79/85 (92%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKM
Sbjct: 17 ARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKM 76
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETF P+MY+ +QA LSL+A
Sbjct: 77 TQIMFETFAVPSMYIGMQAALSLHA 101
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTG VLDSGDGVS+ VPIY
Sbjct: 102 SGRTTGTVLDSGDGVSYIVPIY 123
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 208 MVGMGQKDSYVGDEAQAK 261
MVGM + D +VGD+A+A+
Sbjct: 1 MVGMNENDLFVGDDAEAR 18
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 155 bits (377), Expect = 2e-38
Identities = 73/102 (71%), Positives = 83/102 (81%)
Frame = +3
Query: 204 RDGRYGTEGLLCRR*GTSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 383
RDG E + G + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 384 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYS 135
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQA 258
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIY 574
SGRTTG+VLD G+ VSHTVP+Y
Sbjct: 136 SGRTTGVVLDLGERVSHTVPVY 157
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 109 bits (261), Expect = 2e-24
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +3
Query: 270 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 449
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 450 ETFNTPAMYVAIQAVLSLYA 509
E +N +++ IQAVL+LYA
Sbjct: 126 EKYNFAGVFIQIQAVLTLYA 145
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 246
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
Score = 35.1 bits (77), Expect = 0.036
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 512 GRTTGIVLDSGDGVSHTVPI 571
G TG+V+DSGDGV+H VP+
Sbjct: 147 GLLTGLVIDSGDGVTHVVPV 166
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +3
Query: 276 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 455
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 456 FNTPAMYVAIQAVLSLYA 509
FN P +Y+A+ +VL+L A
Sbjct: 146 FNVPGLYIAVNSVLALAA 163
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 97 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 183
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 521 TGIVLDSGDGVSHTVPI 571
TG+V+D GDG +H VP+
Sbjct: 173 TGVVVDVGDGATHVVPV 189
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +3
Query: 258 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 437
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 438 QIMFETFNTPAMYVAIQAVLSLYA 509
++MFE + PA+++A VL+ +A
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFA 168
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 186
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.1 bits (159), Expect = 4e-12
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 461
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 462 TPAMYVAIQAVLSLYA 509
Y + QAVLSLYA
Sbjct: 117 VSGFYASEQAVLSLYA 132
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 97 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 189
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 258 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 431
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 186
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 455
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 456 FNTPAMYVA-IQAVLSLY 506
F ++Y+A Q+++ LY
Sbjct: 121 FGFSSLYIAHPQSLVHLY 138
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 192
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 461
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 462 TPAMYVAIQAVLS 500
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 246
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.083
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 221 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 84
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = +3
Query: 381 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSPT 560
P L+T+ P++PK Q +T A Q L+ P PP P P
Sbjct: 191 PQLVTKEPISPKPLSSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPP-----PPPPPPP 245
Query: 561 PCPSTEGYRHS 593
P P+T R++
Sbjct: 246 PSPTTAAKRNA 256
>At5g66770.1 68418.m08416 scarecrow transcription factor family
protein
Length = 584
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 583 YPSVDGHGVGDTVAGVQHDT--GGTTGAYSESTAWMATYMAG 464
+P++D H T G + GGT G ES WM T ++G
Sbjct: 82 FPNLDHHHATTTGGGFRLSDFGGGTGGGEFESDEWMETLISG 123
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Frame = +3
Query: 342 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 491
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 492 VLSLYA 509
VL+LYA
Sbjct: 241 VLALYA 246
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Frame = +3
Query: 342 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 491
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 492 VLSLYA 509
VL+LYA
Sbjct: 241 VLALYA 246
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 270 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 431
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 270 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 431
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 513 VVPPVSCWTPATVSPTPCPSTEGYRHS 593
+ PP+SC TP PCP + HS
Sbjct: 645 IPPPLSCGTPVPSCQLPCPIPQPCGHS 671
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 398 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 499
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At5g50400.1 68418.m06242 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 611
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 593 GVAVSFSRWARCGRHRRRSPA 531
G AV F W+R G RRSPA
Sbjct: 193 GEAVPFVEWSRKGTRSRRSPA 213
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 197 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 75
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g19350.5 68414.m02408 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 335
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 495 LSLYAPVVPPVSCWTPATVSPTPCPSTEGY 584
+S APV PPVS +P + +P P P+ E +
Sbjct: 168 ISNSAPVTPPVS--SPTSRNPKPLPTWESF 195
>At1g19350.4 68414.m02407 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 335
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 495 LSLYAPVVPPVSCWTPATVSPTPCPSTEGY 584
+S APV PPVS +P + +P P P+ E +
Sbjct: 168 ISNSAPVTPPVS--SPTSRNPKPLPTWESF 195
>At1g19350.3 68414.m02405 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 357
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 495 LSLYAPVVPPVSCWTPATVSPTPCPSTEGY 584
+S APV PPVS +P + +P P P+ E +
Sbjct: 190 ISNSAPVTPPVS--SPTSRNPKPLPTWESF 217
>At1g19350.1 68414.m02406 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 335
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 495 LSLYAPVVPPVSCWTPATVSPTPCPSTEGY 584
+S APV PPVS +P + +P P P+ E +
Sbjct: 168 ISNSAPVTPPVS--SPTSRNPKPLPTWESF 195
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 392 H*GSPQPQGQQREDDPDHVRN 454
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 309 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 458
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,638,902
Number of Sequences: 28952
Number of extensions: 373674
Number of successful extensions: 1241
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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