Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1006
         (422 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     26   0.13 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   1.2  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   2.1  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   2.1  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   2.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   2.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   3.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.7  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 26.2 bits (55), Expect = 0.13
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = -2

Query: 292 SPSVPYRPSRHDGGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFVAHLELVKLVR 113
           SP++P+  +RHDG    ++G     +I    +G+       Y       V HLE ++  R
Sbjct: 131 SPAMPHNLTRHDGSVIKNQGMPTMEAI--ARSGIWENCRAAYED----IVKHLERLREER 184

Query: 112 CRCDK 98
           C  D+
Sbjct: 185 CDPDR 189


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 233 GTRREEHHLLRNRP 192
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 233 GTRREEHHLLRNRP 192
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 233 GTRREEHHLLRNRP 192
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 330 PDPQIPHRTRNRH 368
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 124 KLVRCRCDKMKIKRPAVTANREKQIP 47
           K  R   D+ ++ RPA  ANR    P
Sbjct: 330 KRPRPNIDRHEVTRPAAPANRGNGFP 355


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 222 RGASSPAKPALHIPEPLSTTNAATFSS 142
           +GA SP+     +P   ++T+  T+SS
Sbjct: 72  QGAPSPSSTPSSLPTQRTSTSNPTYSS 98


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 399 MPNLLHVIPVSDDSVFD 349
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 399 MPNLLHVIPVSDDSVFD 349
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 399 MPNLLHVIPVSDDSVFD 349
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 399 MPNLLHVIPVSDDSVFD 349
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,355
Number of Sequences: 336
Number of extensions: 2297
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)