Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1006
(422 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 127 4e-30
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 127 4e-30
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 127 4e-30
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 127 4e-30
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 127 4e-30
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 127 4e-30
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 127 4e-30
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 127 4e-30
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 127 4e-30
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 127 4e-30
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 118 2e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 103 7e-23
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 103 7e-23
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 103 7e-23
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 97 3e-21
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 71 5e-13
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 55 2e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 50 9e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.021
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.021
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 32 0.19
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 4.2
Z83236-6|CAB05783.1| 132|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81047-2|CAB02828.1| 376|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 7.3
AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf gro... 27 7.3
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 26 9.7
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 127 bits (306), Expect = 4e-30
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 94
Score = 77.8 bits (183), Expect = 3e-15
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +2
Query: 143 DEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
+E++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 38
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 127 bits (306), Expect = 4e-30
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 127 bits (306), Expect = 4e-30
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
Score = 83.4 bits (197), Expect = 6e-17
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 127 bits (306), Expect = 4e-30
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 127 bits (306), Expect = 4e-30
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 127 bits (306), Expect = 4e-30
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 127 bits (306), Expect = 4e-30
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
Score = 81.8 bits (193), Expect = 2e-16
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD+ VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 127 bits (306), Expect = 4e-30
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 127 bits (306), Expect = 4e-30
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL
Sbjct: 23 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 81
Score = 47.2 bits (107), Expect = 5e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 191 KAGFAGDDAPRAVFPSIVGRP 253
+AGFAGDDAPRAVFPSIVGRP
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRP 25
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 127 bits (306), Expect = 4e-30
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 118 bits (283), Expect = 2e-27
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +1
Query: 268 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 51
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 103 bits (246), Expect = 7e-23
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 393
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 83.4 bits (197), Expect = 6e-17
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 103 bits (246), Expect = 7e-23
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 393
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 103 bits (246), Expect = 7e-23
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 393
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 97.5 bits (232), Expect = 3e-21
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 384
G+ H GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 83.4 bits (197), Expect = 6e-17
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 70.5 bits (165), Expect = 5e-13
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 408
G+ +H VM G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F
Sbjct: 39 GRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIF 93
Score = 45.2 bits (102), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
+V+DNGSG+ KAGFAG+ P+ F + VGRP
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRP 41
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 55.2 bits (127), Expect = 2e-08
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1
Query: 286 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 408
KD VG+E R +L + YP+++GIV NWDDM +W HTF
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTF 93
Score = 45.6 bits (103), Expect = 1e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 49.6 bits (113), Expect = 9e-07
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 265 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + L
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYL 108
Score = 36.3 bits (80), Expect = 0.009
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 137 MCDEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 244
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.021
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 283 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 408
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.021
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 283 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 408
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 244
++V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 375 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 265
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z83236-6|CAB05783.1| 132|Caenorhabditis elegans Hypothetical
protein K10H10.7 protein.
Length = 132
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 231 SPRSWEGPPSWRDGRYGTE 287
+PR W+ P +W Y TE
Sbjct: 63 APRQWDDPSTWEPNEYETE 81
>Z81047-2|CAB02828.1| 376|Caenorhabditis elegans Hypothetical
protein C41G6.3 protein.
Length = 376
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 170 DNGSGMCKAGFAGDDAPRAVFPSIVGRPPIMA*W 271
DN + +CK+ F PR V + V P +M+ W
Sbjct: 195 DNANEICKSMFESFITPRYVLATPVNLPKLMSTW 228
>Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical
protein F21H7.4 protein.
Length = 282
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 310 PHLLHKSPSVPYRPSRHDGGPSHDRG 233
PH H+ P P+RP R P D G
Sbjct: 80 PHRPHRPPHRPHRPPRPPPRPECDEG 105
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 26.6 bits (56), Expect = 7.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = -1
Query: 398 CQIFSMSSQLVTIPC-SMGYLRVRIPL----LLCASSPT*ESFCPIP 273
CQ+FS QLVT+ SMG +++++ + LL + S T + P P
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNP 297
>AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf growth
factor relatedprotein 1 protein.
Length = 304
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 325 LFCSVPHLLHKSPSVPYRPSRHDGGPSHDRGEHGAR 218
L C +LHK R +H GGP RG HG R
Sbjct: 246 LKCEEGKILHKDRCDCVRRRQHHGGP---RGHHGHR 278
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 253 PHHGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 408
P H + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 631 PRHEISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 253 PHHGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 408
P H + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 631 PRHEISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,876,498
Number of Sequences: 27780
Number of extensions: 241652
Number of successful extensions: 794
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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