Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1006
(422 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 124 2e-29
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 124 2e-29
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 124 2e-29
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 123 4e-29
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 123 4e-29
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 123 6e-29
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 123 6e-29
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 123 6e-29
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 123 6e-29
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 114 3e-26
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 91 3e-19
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 84 4e-17
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 60 5e-10
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 56 1e-08
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 55 2e-08
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 48 3e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 37 0.005
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 29 1.7
At2g17480.1 68415.m02019 seven transmembrane MLO family protein ... 28 2.3
At5g40810.1 68418.m04955 cytochrome c1, putative cytochrome c1, ... 28 3.0
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 3.0
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 3.0
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 27 4.0
At2g17787.1 68415.m02061 expressed protein 27 4.0
At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family... 27 5.2
At5g35604.1 68418.m04242 hypothetical protein 27 6.9
At2g27660.1 68415.m03352 DC1 domain-containing protein contains ... 27 6.9
At5g56630.1 68418.m07070 phosphofructokinase family protein simi... 26 9.1
At2g25680.1 68415.m03078 expressed protein ; expression supporte... 26 9.1
At1g62360.1 68414.m07036 homeobox protein SHOOT MERISTEMLESS (ST... 26 9.1
At1g16690.2 68414.m01999 transcription factor-related similar to... 26 9.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 26 9.1
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 124 bits (300), Expect = 2e-29
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ HHGVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNEL
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
Score = 62.5 bits (145), Expect = 1e-10
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
+ + +V DNG+GM KAGFAGDDAPRAVFPS+VGRP
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP 40
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 124 bits (300), Expect = 2e-29
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ HHGVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNEL
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
Score = 62.5 bits (145), Expect = 1e-10
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
+ + +V DNG+GM KAGFAGDDAPRAVFPS+VGRP
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP 40
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 124 bits (300), Expect = 2e-29
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ HHGVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNEL
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
Score = 62.5 bits (145), Expect = 1e-10
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
+ + +V DNG+GM KAGFAGDDAPRAVFPS+VGRP
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP 40
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 123 bits (297), Expect = 4e-29
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNEL
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL 96
Score = 64.9 bits (151), Expect = 2e-11
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
E + LV DNG+GM KAGFAGDDAPRAVFPSIVGRP
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 123 bits (297), Expect = 4e-29
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNEL
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL 96
Score = 64.9 bits (151), Expect = 2e-11
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
E + LV DNG+GM KAGFAGDDAPRAVFPSIVGRP
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 123 bits (296), Expect = 6e-29
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNEL
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
Score = 64.9 bits (151), Expect = 2e-11
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
E + LV DNG+GM KAGFAGDDAPRAVFPSIVGRP
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 123 bits (296), Expect = 6e-29
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNEL
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
Score = 64.9 bits (151), Expect = 2e-11
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
E + LV DNG+GM KAGFAGDDAPRAVFPSIVGRP
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 123 bits (296), Expect = 6e-29
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNEL
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
Score = 64.9 bits (151), Expect = 2e-11
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
E + LV DNG+GM KAGFAGDDAPRAVFPSIVGRP
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 123 bits (296), Expect = 6e-29
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNEL
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
Score = 64.9 bits (151), Expect = 2e-11
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
E + LV DNG+GM KAGFAGDDAPRAVFPSIVGRP
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 114 bits (274), Expect = 3e-26
Identities = 46/59 (77%), Positives = 55/59 (93%)
Frame = +1
Query: 244 GKAPHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ H GVMVGM +KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNEL
Sbjct: 39 GRPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNEL 97
Score = 64.9 bits (151), Expect = 2e-11
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 143 DEKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
DE VA +V DNG+GM KAGFAGDDAPRAVFPS+VGRP
Sbjct: 6 DESVA-IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP 41
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 91.1 bits (216), Expect = 3e-19
Identities = 35/51 (68%), Positives = 46/51 (90%)
Frame = +1
Query: 268 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+EL
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSEL 51
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 83.8 bits (198), Expect = 4e-17
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = +1
Query: 274 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
G+ +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNEL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNEL 85
Score = 50.4 bits (115), Expect = 5e-07
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
+V D G GM +AGFAGD+AP+ VFP +VGRP
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRP 34
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 60.5 bits (140), Expect = 5e-10
Identities = 24/45 (53%), Positives = 29/45 (64%)
Frame = +1
Query: 286 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNEL 95
Score = 45.6 bits (103), Expect = 1e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 247
++V+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 280 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 414
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRN 110
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 55.2 bits (127), Expect = 2e-08
Identities = 22/34 (64%), Positives = 31/34 (91%)
Frame = +2
Query: 146 EKVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 247
++V+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 39.9 bits (89), Expect = 7e-04
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 295 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTF 408
YVG +A S +R + + PI+ GIV++WD ++ IW H F
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAF 114
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +1
Query: 289 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N L
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYL 113
Score = 35.9 bits (79), Expect = 0.011
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 158 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 244
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
+V+DNG+ + G+AG+ PR VF +IV RP
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRP 52
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 253
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 346 PIEHGIVTNWDDMEKIWHHTFYNEL 420
PIE G++ +WD ME + + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 158 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 250
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At2g17480.1 68415.m02019 seven transmembrane MLO family protein /
MLO-like protein 8 (MLO8) identical to membrane protein
Mlo8 [Arabidopsis thaliana] gi|14091586|gb|AAK53801;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 593
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 294 RVLLSHTDHHAMMGGLPTIEGN 229
R+ L TD HA++ G+P ++GN
Sbjct: 355 RMALGITDRHAVVQGMPLVQGN 376
>At5g40810.1 68418.m04955 cytochrome c1, putative cytochrome c1,
heme protein, mitochondrial precursor (Clone PC13III)
[Solanum tuberosum] SWISS-PROT:P25076
Length = 307
Score = 27.9 bits (59), Expect = 3.0
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = -3
Query: 318 ALCLISY---IRVLLSHTDHHAMMGGLPTIEGNTARGA--SSPAKPALHIPEPLSTTNAA 154
++ LISY + V + + AM + ++G G + P K + +PEP S +AA
Sbjct: 108 SMSLISYRDLVGVAYTEEEAKAMAAEIEVVDGPNDEGEMFTRPGKLSDRLPEPYSNESAA 167
Query: 153 TFSS 142
F++
Sbjct: 168 RFAN 171
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 392 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 303
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 384 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 277
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 27.5 bits (58), Expect = 4.0
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = -3
Query: 396 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVLLSHTDHHAMMGGLPTIEGNTA 223
P L V+ ++ D + + + + YI + T GL +G T+
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKPTRGLIVYQGATS 308
Query: 222 RGASSPAKPALHIPEPLSTTNAATFSSHI 136
+SSPA+P + +P +ST A F+S+I
Sbjct: 309 --SSSPAEPLMPVPNDMST--AHRFTSNI 333
>At2g17787.1 68415.m02061 expressed protein
Length = 324
Score = 27.5 bits (58), Expect = 4.0
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 123 FTNSRCATKKLPRW**TMAPVCARPVSQE--MMLLAPCSPRSWEGPPSWRDGRYGTEGLL 296
F +SR T KL + ++ R VS+E M L+ C+P E P S G LL
Sbjct: 182 FGSSREITTKLNKEKKSVPSKDNRKVSKEKKMPSLSSCNPLEQEKPTSSHQETPGPSKLL 241
Query: 297 CRR 305
CR+
Sbjct: 242 CRK 244
>At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family
protein
Length = 883
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -3
Query: 279 HTDHHAMMGGLPTIEGNTARGASSPAKPALHIPEPLSTTN 160
H + +GG+ N+ G S +K +H+P P+S ++
Sbjct: 213 HCPVNKELGGVTLPSTNSVLGVYSSSKDPVHVPSPVSRSS 252
>At5g35604.1 68418.m04242 hypothetical protein
Length = 298
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2
Query: 334 SGYLFCSVPHLLHKSPSVPYRPSRHDGGPSHDR 236
S Y F H H+ P RPSR + P D+
Sbjct: 53 SAYAFRPTLHREHRGGRSPRRPSRGNSSPRRDK 85
>At2g27660.1 68415.m03352 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 718
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 310 PHLLHKSPSVPYRPSRHDGGPSH 242
PHLL S S P + H G P H
Sbjct: 180 PHLLQHSTSAPNPHTHHAGHPQH 202
>At5g56630.1 68418.m07070 phosphofructokinase family protein similar
to phosphofructokinase [Amycolatopsis methanolica]
GI:17432243; contains Pfam profile PF00365:
Phosphofructokinase
Length = 485
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 331 GYLFCSVPHLLHKSPSVPYRPSRHDGGPSH 242
GY+ VPHL+ P +P P+ P++
Sbjct: 17 GYILQDVPHLIDYLPDLPTYPNPLQDNPAY 46
>At2g25680.1 68415.m03078 expressed protein ; expression supported
by MPSS
Length = 456
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -3
Query: 411 VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIR 292
+ G+M + ++IP+S V G+ Q +FA+ + YIR
Sbjct: 126 ISGLMQLVFNIIPLS---VVRGIQLSQGLAFAMSAVKYIR 162
>At1g62360.1 68414.m07036 homeobox protein SHOOT MERISTEMLESS (STM)
identical to homeobox protein SHOOT MERISTEMLESS (STM)
SP:Q38874 from [Arabidopsis thaliana]
Length = 382
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 173 NGSGMCKAGFAGDDAPRAVFPSIVGRPPIM 262
+ S C FAGD++ + P ++ PPIM
Sbjct: 5 SNSTSCPMAFAGDNSDGPMCPMMMMMPPIM 34
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +1
Query: 304 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
D A L++KY + H I + W + +IW L
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRL 207
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +1
Query: 304 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 420
D A L++KY + H I + W + +IW L
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRL 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,334,668
Number of Sequences: 28952
Number of extensions: 229622
Number of successful extensions: 632
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 655255392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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