Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1005
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16621-10|AAA28227.1| 507|Caenorhabditis elegans Temporarily as... 101 4e-22
L16621-9|AAL11487.1| 568|Caenorhabditis elegans Temporarily ass... 101 4e-22
L14324-7|AAA28181.2| 565|Caenorhabditis elegans Prolyl carboxy ... 100 2e-21
U51993-4|AAB36854.2| 540|Caenorhabditis elegans Hypothetical pr... 53 1e-07
L14331-7|AAN65310.1| 510|Caenorhabditis elegans Hypothetical pr... 50 1e-06
L14331-6|AAN65311.1| 473|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U42439-5|AAA83509.2| 542|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U42439-4|AAA83508.1| 582|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U41273-1|AAA82453.1| 516|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U40801-7|ABN43096.1| 187|Caenorhabditis elegans Hypothetical pr... 39 0.003
AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical ... 30 1.5
AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5 prot... 30 1.5
U40411-3|AAC47066.2| 270|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z92773-3|CAB07129.3| 267|Caenorhabditis elegans Hypothetical pr... 27 7.9
>L16621-10|AAA28227.1| 507|Caenorhabditis elegans Temporarily
assigned gene nameprotein 282, isoform a protein.
Length = 507
Score = 101 bits (242), Expect = 4e-22
Identities = 48/98 (48%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Frame = +3
Query: 222 GK*GSNRSICQYTGFMWEIAAEYQAKIVFAEHRYYGESKPFGNKS-LEKEYIGYLTSAQA 398
G GS + + TGFMW++A E +A +VF EHR+YG+S+PF N+S + ++GYL+S QA
Sbjct: 83 GNEGSLEAFAENTGFMWDLAPELKAAVVFVEHRFYGKSQPFKNESYTDIRHLGYLSSQQA 142
Query: 399 LADYADLINYLQKDEIK--PRYPVIAFGGSYGGMLAAY 506
LAD+A + + + ++IK + VIAFGGSYGGML+A+
Sbjct: 143 LADFALSVQFFKNEKIKGAQKSAVIAFGGSYGGMLSAW 180
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +1
Query: 85 YLYQTKWFEVPLDHFGLGRKETFKIKYLENEDYWNKNEYGPIFFYTGNEGQIEAFA 252
Y Y+ + + P+D F F ++Y N D++ GPI FYTGNEG +EAFA
Sbjct: 39 YKYEEGYLKAPIDPFAFTNDLEFDLRYFLNIDHYETG--GPILFYTGNEGSLEAFA 92
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 494 VSCLYRIKYPHLVAGAIAASASIHMFS 574
+S +RIKYPH+V GAIAASA + F+
Sbjct: 177 LSAWFRIKYPHIVDGAIAASAPVFWFT 203
>L16621-9|AAL11487.1| 568|Caenorhabditis elegans Temporarily
assigned gene nameprotein 282, isoform b protein.
Length = 568
Score = 101 bits (242), Expect = 4e-22
Identities = 48/98 (48%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Frame = +3
Query: 222 GK*GSNRSICQYTGFMWEIAAEYQAKIVFAEHRYYGESKPFGNKS-LEKEYIGYLTSAQA 398
G GS + + TGFMW++A E +A +VF EHR+YG+S+PF N+S + ++GYL+S QA
Sbjct: 144 GNEGSLEAFAENTGFMWDLAPELKAAVVFVEHRFYGKSQPFKNESYTDIRHLGYLSSQQA 203
Query: 399 LADYADLINYLQKDEIK--PRYPVIAFGGSYGGMLAAY 506
LAD+A + + + ++IK + VIAFGGSYGGML+A+
Sbjct: 204 LADFALSVQFFKNEKIKGAQKSAVIAFGGSYGGMLSAW 241
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +1
Query: 85 YLYQTKWFEVPLDHFGLGRKETFKIKYLENEDYWNKNEYGPIFFYTGNEGQIEAFA 252
Y Y+ + + P+D F F ++Y N D++ GPI FYTGNEG +EAFA
Sbjct: 100 YKYEEGYLKAPIDPFAFTNDLEFDLRYFLNIDHYETG--GPILFYTGNEGSLEAFA 153
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 494 VSCLYRIKYPHLVAGAIAASASIHMFS 574
+S +RIKYPH+V GAIAASA + F+
Sbjct: 238 LSAWFRIKYPHIVDGAIAASAPVFWFT 264
>L14324-7|AAA28181.2| 565|Caenorhabditis elegans Prolyl carboxy
peptidase like protein1 protein.
Length = 565
Score = 99.5 bits (237), Expect = 2e-21
Identities = 51/106 (48%), Positives = 71/106 (66%), Gaps = 7/106 (6%)
Frame = +3
Query: 210 FLLHGK*GSNRSICQYTGFMWEIAAEYQAKIVFAEHRYYGESKPFGNKSLEK-EYIGYLT 386
F G G S TG M+++A + A I+FAEHR+YG+++PFGN+S +GYLT
Sbjct: 80 FFYTGNEGGLESFVTATGMMFDLAPMFNASIIFAEHRFYGQTQPFGNQSYASLANVGYLT 139
Query: 387 SAQALADYADLINYLQKD--EIKPRYP----VIAFGGSYGGMLAAY 506
S QALADYA+L+ L++D + K +P VI+FGGSYGGML+A+
Sbjct: 140 SEQALADYAELLTELKRDNNQFKMTFPAATQVISFGGSYGGMLSAW 185
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +1
Query: 94 QTKWFE-VPLDHFGLGRKETFKIKYLENEDYWNKNEYGPIFFYTGNEGQIEAF 249
QT W++ + LDHF G TF ++ + N ++ GPIFFYTGNEG +E+F
Sbjct: 42 QTVWYKNMKLDHFTWGDTRTFDMRVMWNNTFYKPG--GPIFFYTGNEGGLESF 92
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 494 VSCLYRIKYPHLVAGAIAASASI 562
+S +R KYPH+V GA A SA +
Sbjct: 182 LSAWFRQKYPHIVKGAWAGSAPL 204
>U51993-4|AAB36854.2| 540|Caenorhabditis elegans Hypothetical
protein F56F10.1 protein.
Length = 540
Score = 53.2 bits (122), Expect = 1e-07
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Frame = +3
Query: 219 HGK*GSNRSICQYTGFMWEIAAEYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQA 398
+GK +N ++ QY W A E+ A + EHR++G+S P ++ + YLT+ QA
Sbjct: 102 NGKWAANPNV-QY--LQW--AKEFGADVFDLEHRFFGDSWPI--PDMQTSSLRYLTTQQA 154
Query: 399 LADYADLINYL-QKDEIK-PRYPVIAFGGSYGGMLAAY 506
LAD A I ++ Q+ K PR+ + FGGSY G LAA+
Sbjct: 155 LADLAFFIEFMNQQYGFKNPRW--VTFGGSYPGSLAAW 190
>L14331-7|AAN65310.1| 510|Caenorhabditis elegans Hypothetical
protein K12H4.7a protein.
Length = 510
Score = 50.0 bits (114), Expect = 1e-06
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = +3
Query: 210 FLLHGK*GSNRSI-CQYTGF-MWEIAAEYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYL 383
FL+ G G S Y G + +AA+ A + EHR+YGE+ P + S+ + YL
Sbjct: 96 FLMLGGEGPESSYWVSYPGLEITNLAAKQGAWVFDIEHRFYGETHPTSDMSVPN--LKYL 153
Query: 384 TSAQALADYADLINYL-QKDEIKPRYPVIAFGGSYGGMLAAY 506
+SAQA+ D A I + K + FGGSY G LAA+
Sbjct: 154 SSAQAIEDAAAFIKAMTAKFPQLANAKWVTFGGSYSGALAAW 195
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 106 FEVPLDHFGLGRKETFKIKYLENEDYWNKNEYGPIFFYTGNEG 234
F LDHF +TF+ +Y N ++ GP F G EG
Sbjct: 63 FTQTLDHFDSSVGKTFQQRYYHNNQWYKAG--GPAFLMLGGEG 103
>L14331-6|AAN65311.1| 473|Caenorhabditis elegans Hypothetical
protein K12H4.7b protein.
Length = 473
Score = 50.0 bits (114), Expect = 1e-06
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = +3
Query: 210 FLLHGK*GSNRSI-CQYTGF-MWEIAAEYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYL 383
FL+ G G S Y G + +AA+ A + EHR+YGE+ P + S+ + YL
Sbjct: 96 FLMLGGEGPESSYWVSYPGLEITNLAAKQGAWVFDIEHRFYGETHPTSDMSVPN--LKYL 153
Query: 384 TSAQALADYADLINYL-QKDEIKPRYPVIAFGGSYGGMLAAY 506
+SAQA+ D A I + K + FGGSY G LAA+
Sbjct: 154 SSAQAIEDAAAFIKAMTAKFPQLANAKWVTFGGSYSGALAAW 195
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 106 FEVPLDHFGLGRKETFKIKYLENEDYWNKNEYGPIFFYTGNEG 234
F LDHF +TF+ +Y N ++ GP F G EG
Sbjct: 63 FTQTLDHFDSSVGKTFQQRYYHNNQWYKAG--GPAFLMLGGEG 103
>U42439-5|AAA83509.2| 542|Caenorhabditis elegans Hypothetical
protein F19C7.4 protein.
Length = 542
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +3
Query: 267 MWEIAAEYQAKIVFAEHRYYG--ESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKD 440
M + AE+QA EHR+YG E P G+++ + LT QALAD + I +
Sbjct: 113 MMKWVAEFQAAAFQVEHRFYGSKEYSPIGDQTTAS--MKLLTIDQALADIKEFITQINAL 170
Query: 441 EIKPRYPV-IAFGGSYGGMLAAYIG*SIP 524
K P+ + FGGSY G L+A+ + P
Sbjct: 171 YFKDDKPIWVTFGGSYPGSLSAFFRETYP 199
Score = 31.9 bits (69), Expect = 0.37
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +2
Query: 491 NVSCLYRIKYPHLVAGAIAASASIHMF 571
++S +R YP + AGA+++S+++H+F
Sbjct: 189 SLSAFFRETYPEMTAGAVSSSSAVHVF 215
>U42439-4|AAA83508.1| 582|Caenorhabditis elegans Hypothetical
protein F19C7.2 protein.
Length = 582
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +3
Query: 267 MWEIAAEYQAKIVFAEHRYYG--ESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKD 440
M + AE+QA EHR+YG E P G+++ + LT QALAD + I +
Sbjct: 113 MMKWVAEFQAAAFQVEHRFYGSKEYSPIGDQTTAS--MKLLTIDQALADIKEFITQMNAL 170
Query: 441 EIKPRYPV-IAFGGSYGGMLAAYIG*SIP 524
K P+ + FGGSY G L+A+ + P
Sbjct: 171 YFKDDKPIWVTFGGSYPGSLSAFFRETYP 199
Score = 31.9 bits (69), Expect = 0.37
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +2
Query: 491 NVSCLYRIKYPHLVAGAIAASASIHMF 571
++S +R YP + AGA+++S+++H+F
Sbjct: 189 SLSAFFRETYPEMTAGAVSSSSAVHVF 215
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 279 AAEYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKD-EIKPR 455
A + A++ +HRYYG SKP ++ + + YLTS QA+ D I Y + P
Sbjct: 103 AKRFGAQLFALKHRYYGASKP-NFQNFDASALRYLTSRQAIQDILSFIKYANTQFNMNPD 161
Query: 456 YPVIAFGGSYGGMLAA 503
+ +G YGG+LAA
Sbjct: 162 VRWVLWGTGYGGILAA 177
Score = 35.5 bits (78), Expect = 0.030
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 270 WEIAAE-YQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKDEI 446
W I+A+ Y A + EHR+YG+S N +L L+S Q L D A+ I + +
Sbjct: 604 WLISAQKYGATVYLLEHRFYGDSLVGNNTNL-----NLLSSLQVLYDSAEFIKAINY-KT 657
Query: 447 KPRYPVIAFGGSY 485
+ P I FG S+
Sbjct: 658 QSSTPWITFGRSF 670
>Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.11 protein.
Length = 1080
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 279 AAEYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQ-KDEIKPR 455
A ++ A I EHRYYG+S+P +K + + + +L S QA+ D I + + + P
Sbjct: 106 AKQFGATIFSLEHRYYGQSRPNFDK-FDAQNLRHLNSLQAILDIISFIKSVNVQFNMDPD 164
Query: 456 YPVIAFGGSYGGMLAA 503
+ +G YGG+LAA
Sbjct: 165 VRWVLWGAGYGGILAA 180
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +3
Query: 279 AAEYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKDEIKPRY 458
A +Y A + EHR+YG+S N + + L S Q L D A+ I +
Sbjct: 639 AKKYGATVYLLEHRFYGDSVVGDNTNFK-----LLNSLQMLYDLAEFIKAV-NIRTGTSN 692
Query: 459 PVIAFGGSYGGMLAAYI 509
P I FGGSY G ++A++
Sbjct: 693 PWITFGGSYSGAMSAWM 709
>Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 279 AAEYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKDEIKPRY 458
A +Y A + EHR+YGES+ N + + L+S Q + D AD I + +
Sbjct: 637 AKKYGATVYMLEHRFYGESRVGDNTNFNR-----LSSLQMIYDIADFIRSV-NIKSGTSN 690
Query: 459 PVIAFGGSYGGMLAAY 506
P I FGGSY G+++A+
Sbjct: 691 PWITFGGSYSGLISAW 706
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 279 AAEYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQ-KDEIKPR 455
A ++ A I EHRYYGESKP +K L+ + +L S QA D I Y + +
Sbjct: 104 AKQFGATIFTLEHRYYGESKPNVDK-LDAYNLRHLNSFQATQDVISFIKYANVQFNMDQD 162
Query: 456 YPVIAFGGSYGGMLAA 503
+ +G YGG++AA
Sbjct: 163 VRWVVWGIGYGGIIAA 178
>Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 279 AAEYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKDEIKPRY 458
A +Y A + EHR+YGES+ N + + L+S Q + D AD I + +
Sbjct: 637 AKKYGATVYMLEHRFYGESRVGDNTNFNR-----LSSLQMIYDIADFIRSV-NIKSGTSN 690
Query: 459 PVIAFGGSYGGMLAAY 506
P I FGGSY G+++A+
Sbjct: 691 PWITFGGSYSGLISAW 706
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 279 AAEYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQ-KDEIKPR 455
A ++ A I EHRYYGESKP +K L+ + +L S QA D I Y + +
Sbjct: 104 AKQFGATIFTLEHRYYGESKPNVDK-LDAYNLRHLNSFQATQDVISFIKYANVQFNMDQD 162
Query: 456 YPVIAFGGSYGGMLAA 503
+ +G YGG++AA
Sbjct: 163 VRWVVWGIGYGGIIAA 178
>U41273-1|AAA82453.1| 516|Caenorhabditis elegans Hypothetical
protein C26B9.5 protein.
Length = 516
Score = 44.4 bits (100), Expect = 6e-05
Identities = 29/83 (34%), Positives = 41/83 (49%)
Frame = +3
Query: 255 YTGFMWEIAAEYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQ 434
Y W A E+ A + EHR +G+S+P+ + S+ I T QALAD + I +
Sbjct: 113 YQYLQW--AKEFGADVFQLEHRCFGQSRPYPDTSMPG--IKVCTMTQALADIHNFIQQMN 168
Query: 435 KDEIKPRYPVIAFGGSYGGMLAA 503
+ I FGGSY G L+A
Sbjct: 169 RRFNFQNPKWITFGGSYPGTLSA 191
>U40801-7|ABN43096.1| 187|Caenorhabditis elegans Hypothetical
protein F28E10.5 protein.
Length = 187
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +3
Query: 267 MWEIAAEYQAKIVFAEHRYYG--ESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKD 440
M + AE+QA EHR+YG E P G+++ + LT QALAD + I +
Sbjct: 116 MMKWVAEFQAAAFQVEHRFYGSKEYSPIGDQTTAS--MKLLTIDQALADIKEFITQMNAL 173
Query: 441 EIKPRYPV-IAFGG 479
K P+ + FGG
Sbjct: 174 YFKDDKPIWVTFGG 187
>AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical
protein Y66A7A.5 protein.
Length = 685
Score = 29.9 bits (64), Expect = 1.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 154 KIKYLENEDYWNKNEYGPIF 213
K +Y+E+ +WN EY P+F
Sbjct: 216 KPEYIESRPFWNSEEYDPVF 235
>AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5
protein.
Length = 738
Score = 29.9 bits (64), Expect = 1.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 154 KIKYLENEDYWNKNEYGPIF 213
K +Y+E+ +WN EY P+F
Sbjct: 216 KPEYIESRPFWNSEEYDPVF 235
>U40411-3|AAC47066.2| 270|Caenorhabditis elegans Hypothetical
protein B0403.3 protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 70 NVNTHYLYQTKWFEVPLD 123
+ N H +Y T++FE+PLD
Sbjct: 51 HANFHKIYDTEYFEIPLD 68
>Z92773-3|CAB07129.3| 267|Caenorhabditis elegans Hypothetical
protein W08E3.4 protein.
Length = 267
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/34 (26%), Positives = 23/34 (67%)
Frame = -1
Query: 280 AISHMKPVYWQMLLFDPHFPCKRKLVHIHFYSSN 179
+++ + P+YW+ L+F C++ L +++F+ +N
Sbjct: 36 SLAGVGPIYWRFLVF--KLRCEQPLEYLNFFKTN 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,906,086
Number of Sequences: 27780
Number of extensions: 333009
Number of successful extensions: 815
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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