Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1004
         (448 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   1.2  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   3.7  
AY752904-1|AAV30078.1|   84|Anopheles gambiae peroxidase 10 prot...    23   3.7  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   6.5  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 46  PGGPMTCGDMLGEIGCGRRR 105
           P   + CGD  G  GC RRR
Sbjct: 121 PFDRVVCGDFAGPNGCPRRR 140


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 65  AAICWERLDAEGGGSCIVADYGRGLHPA 148
           A++C  ++  EG    ++A  G  +HPA
Sbjct: 395 ASVCPAQVTIEGHALTVIATDGEPVHPA 422


>AY752904-1|AAV30078.1|   84|Anopheles gambiae peroxidase 10
           protein.
          Length = 84

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 109 VHCGGLWERPTSSNGEIQADDD*VSVAFNCITFQKVDRYFY 231
           ++ GG+ E P   +G +  +     +A     FQ+ DRYFY
Sbjct: 19  LYVGGILEPPV--DGGVVGETFAELIADQFAKFQRGDRYFY 57


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 231 LILASQLHLYGLKACKTEAVI 293
           ++ A  +H + LKAC  EA++
Sbjct: 37  ILTAPLIHCHPLKACDGEAIL 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,926
Number of Sequences: 2352
Number of extensions: 9888
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37843779
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)