Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1004
         (448 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32865-1|AAA92001.1|  915|Drosophila melanogaster linotte protei...    30   1.2  
AY061465-1|AAL29013.1|  915|Drosophila melanogaster LD41907p pro...    30   1.2  
AE014134-3062|AAF53775.1|  915|Drosophila melanogaster CG10739-P...    30   1.2  
S80561-1|AAB21409.1|  601|Drosophila melanogaster pdm-1 protein.       29   2.2  
M81957-1|AAA28829.1|  601|Drosophila melanogaster POU domain pro...    29   2.2  
M65015-1|AAA28480.1|  601|Drosophila melanogaster dPOU-19 protein.     29   2.2  
AY118387-1|AAM48416.1|  601|Drosophila melanogaster RE34782p pro...    29   2.2  
AE014134-2223|AAF53205.2|  601|Drosophila melanogaster CG6246-PA...    29   2.2  
AE014134-1775|AAF52869.2|  111|Drosophila melanogaster CG5739-PA...    28   6.6  

>U32865-1|AAA92001.1|  915|Drosophila melanogaster linotte protein
           protein.
          Length = 915

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/37 (48%), Positives = 20/37 (54%)
 Frame = -3

Query: 170 SSACISPLLDVGLSHSPPQCTILRLPHPISPSISPQV 60
           SSA    LLDVGL H  P C I+   H  SP I+  V
Sbjct: 367 SSAFFVHLLDVGLQHE-PNCHIVCAAHNRSPDITQLV 402


>AY061465-1|AAL29013.1|  915|Drosophila melanogaster LD41907p
           protein.
          Length = 915

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/37 (48%), Positives = 20/37 (54%)
 Frame = -3

Query: 170 SSACISPLLDVGLSHSPPQCTILRLPHPISPSISPQV 60
           SSA    LLDVGL H  P C I+   H  SP I+  V
Sbjct: 367 SSAFFVHLLDVGLQHE-PNCHIVCAAHNRSPDITQLV 402


>AE014134-3062|AAF53775.1|  915|Drosophila melanogaster CG10739-PA
           protein.
          Length = 915

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/37 (48%), Positives = 20/37 (54%)
 Frame = -3

Query: 170 SSACISPLLDVGLSHSPPQCTILRLPHPISPSISPQV 60
           SSA    LLDVGL H  P C I+   H  SP I+  V
Sbjct: 367 SSAFFVHLLDVGLQHE-PNCHIVCAAHNRSPDITQLV 402


>S80561-1|AAB21409.1|  601|Drosophila melanogaster pdm-1 protein.
          Length = 601

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 194 LNATDT*SSSACISPLLDVGLSHSPPQCTILRLPHPISPSISPQVIGPPGRGADT 30
           LN T   S  +  SP   V  + + P   ++ +P P+ P ISP V+ P G G+ T
Sbjct: 134 LNLTSDNSRHSTQSPSNSVKSATASP-VPVISVPSPVPPMISP-VLAPSGCGSTT 186


>M81957-1|AAA28829.1|  601|Drosophila melanogaster POU domain
           protein protein.
          Length = 601

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 194 LNATDT*SSSACISPLLDVGLSHSPPQCTILRLPHPISPSISPQVIGPPGRGADT 30
           LN T   S  +  SP   V  + + P   ++ +P P+ P ISP V+ P G G+ T
Sbjct: 134 LNLTSDNSRHSTQSPSNSVKSATASP-VPVISVPSPVPPMISP-VLAPSGCGSTT 186


>M65015-1|AAA28480.1|  601|Drosophila melanogaster dPOU-19 protein.
          Length = 601

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 194 LNATDT*SSSACISPLLDVGLSHSPPQCTILRLPHPISPSISPQVIGPPGRGADT 30
           LN T   S  +  SP   V  + + P   ++ +P P+ P ISP V+ P G G+ T
Sbjct: 134 LNLTSDNSRHSTQSPSNSVKSATASP-VPVISVPSPVPPMISP-VLAPSGCGSTT 186


>AY118387-1|AAM48416.1|  601|Drosophila melanogaster RE34782p
           protein.
          Length = 601

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 194 LNATDT*SSSACISPLLDVGLSHSPPQCTILRLPHPISPSISPQVIGPPGRGADT 30
           LN T   S  +  SP   V  + + P   ++ +P P+ P ISP V+ P G G+ T
Sbjct: 134 LNLTSDNSRHSTQSPSNSVKSATASP-VPVISVPSPVPPMISP-VLAPSGCGSTT 186


>AE014134-2223|AAF53205.2|  601|Drosophila melanogaster CG6246-PA
           protein.
          Length = 601

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 194 LNATDT*SSSACISPLLDVGLSHSPPQCTILRLPHPISPSISPQVIGPPGRGADT 30
           LN T   S  +  SP   V  + + P   ++ +P P+ P ISP V+ P G G+ T
Sbjct: 134 LNLTSDNSRHSTQSPSNSVKSATASP-VPVISVPSPVPPMISP-VLAPSGCGSTT 186


>AE014134-1775|AAF52869.2|  111|Drosophila melanogaster CG5739-PA
           protein.
          Length = 111

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = -2

Query: 105 PPPSASNLSQHIAASHRST----GQRGGHLIETNN 13
           PP S+SN S H A   RST    G  GGH   + N
Sbjct: 63  PPDSSSNNSNHRACQSRSTMSSSGTSGGHGSRSTN 97


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,002,569
Number of Sequences: 53049
Number of extensions: 422427
Number of successful extensions: 1265
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)