Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1003
         (612 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22BZ3 Cluster: Putative uncharacterized protein; n=1; ...    36   0.57 
UniRef50_UPI00006CDDA9 Cluster: Insect antifreeze protein; n=1; ...    33   5.3  

>UniRef50_Q22BZ3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1624

 Score = 36.3 bits (80), Expect = 0.57
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = -1

Query: 612 ACIEPVNLGYRGSVCL*STKGSAWA*VV*GRSKQQGCV-CGISCEWCSMRSISCNRCGSG 436
           ACI   NL  +  +CL     + +A V    + +Q C+ C +SC  C  +S +CN C +G
Sbjct: 230 ACITNYNLTQK--LCLLKCSSNQYAQVTDTATTEQKCLQCDVSCLTCFGKSTNCNTCSNG 287


>UniRef50_UPI00006CDDA9 Cluster: Insect antifreeze protein; n=1;
            Tetrahymena thermophila SB210|Rep: Insect antifreeze
            protein - Tetrahymena thermophila SB210
          Length = 3784

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 498  CGISCEWCSMRSISCNRCGSGVSRYRSDS 412
            C  +C+ C     SC +C SG  RY SDS
Sbjct: 1781 CDYTCKACLGSKTSCTKCDSGAYRYPSDS 1809


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,962,830
Number of Sequences: 1657284
Number of extensions: 4922908
Number of successful extensions: 13978
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13970
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)