Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1003
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    29   0.089
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    26   0.83 
DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.    24   3.4  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 29.5 bits (63), Expect = 0.089
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = -1

Query: 525 GRSKQQGCVCGISCEWCSMRSISCNRCGSGVSRYRSDSF 409
           G++    C+   +C WC+M + +  RC   + +Y  + +
Sbjct: 38  GKTTCSQCIQTTNCRWCTMPNFTHPRCHGQIEKYCPEEY 76


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 26.2 bits (55), Expect = 0.83
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 480 WCSMRSISCNRCGSGVSRYRSDSFGEERSTMRC 382
           WC+   +  N C    S  R D  G++   MRC
Sbjct: 79  WCAEGKVGANECKLQCSSLRDDDIGDD---MRC 108


>DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -1

Query: 480 WCSMRSISCNRCGSGVSRYRSDSFGEERSTMRC 382
           WC+   +  N C    S  R D+  ++   MRC
Sbjct: 79  WCAEGKVGANECKLQCSSLRDDNIADD---MRC 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,562
Number of Sequences: 2352
Number of extensions: 4987
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)