Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1003
         (612 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025193-1|ABF17884.1|  837|Drosophila melanogaster FI01127p pro...    30   2.8  
BT015953-1|AAV36838.1|  837|Drosophila melanogaster SD09647p pro...    30   2.8  
AY070708-1|AAL48179.1|  725|Drosophila melanogaster SD01032p pro...    30   2.8  
AE014298-753|AAF46044.1|  837|Drosophila melanogaster CG4136-PA ...    30   2.8  

>BT025193-1|ABF17884.1|  837|Drosophila melanogaster FI01127p
           protein.
          Length = 837

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 22/74 (29%), Positives = 35/74 (47%)
 Frame = -3

Query: 610 LH*AGKLGLQGQRMSLVHQRIGMGIGCVRAE*ATGLRVRHKLRVVQHAQHKLQQVRQRRK 431
           LH A +  LQ Q+++      G G G      +TG    H     QH  H LQQ++Q+++
Sbjct: 611 LH-AAENSLQQQQVAGTGSGSGSGSGSGTGAGSTGPPAHHPYNQQQHLHH-LQQLQQQQQ 668

Query: 430 SLQER*FW*GEEHH 389
             Q++     + HH
Sbjct: 669 QQQQQAQQQQQHHH 682


>BT015953-1|AAV36838.1|  837|Drosophila melanogaster SD09647p
           protein.
          Length = 837

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 22/74 (29%), Positives = 35/74 (47%)
 Frame = -3

Query: 610 LH*AGKLGLQGQRMSLVHQRIGMGIGCVRAE*ATGLRVRHKLRVVQHAQHKLQQVRQRRK 431
           LH A +  LQ Q+++      G G G      +TG    H     QH  H LQQ++Q+++
Sbjct: 611 LH-AAENSLQQQQVAGTGSGSGSGSGSGTGAGSTGPPAHHPYNQQQHLHH-LQQLQQQQQ 668

Query: 430 SLQER*FW*GEEHH 389
             Q++     + HH
Sbjct: 669 QQQQQAQQQQQHHH 682


>AY070708-1|AAL48179.1|  725|Drosophila melanogaster SD01032p
           protein.
          Length = 725

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 22/74 (29%), Positives = 35/74 (47%)
 Frame = -3

Query: 610 LH*AGKLGLQGQRMSLVHQRIGMGIGCVRAE*ATGLRVRHKLRVVQHAQHKLQQVRQRRK 431
           LH A +  LQ Q+++      G G G      +TG    H     QH  H LQQ++Q+++
Sbjct: 499 LH-AAENSLQQQQVAGTGSGSGSGSGSGTGAGSTGPPAHHPYNQQQHLHH-LQQLQQQQQ 556

Query: 430 SLQER*FW*GEEHH 389
             Q++     + HH
Sbjct: 557 QQQQQAQQQQQHHH 570


>AE014298-753|AAF46044.1|  837|Drosophila melanogaster CG4136-PA
           protein.
          Length = 837

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 22/74 (29%), Positives = 35/74 (47%)
 Frame = -3

Query: 610 LH*AGKLGLQGQRMSLVHQRIGMGIGCVRAE*ATGLRVRHKLRVVQHAQHKLQQVRQRRK 431
           LH A +  LQ Q+++      G G G      +TG    H     QH  H LQQ++Q+++
Sbjct: 611 LH-AAENSLQQQQVAGTGSGSGSGSGSGTGAGSTGPPAHHPYNQQQHLHH-LQQLQQQQQ 668

Query: 430 SLQER*FW*GEEHH 389
             Q++     + HH
Sbjct: 669 QQQQQAQQQQQHHH 682


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,490,034
Number of Sequences: 53049
Number of extensions: 254449
Number of successful extensions: 898
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)