Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1001
         (628 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q82D04 Cluster: Putative secreted protein; n=2; Strepto...    36   0.60 
UniRef50_Q7RP46 Cluster: Putative uncharacterized protein PY0161...    35   1.8  
UniRef50_Q01C13 Cluster: Homology to unknown gene; n=2; Ostreoco...    34   3.2  
UniRef50_A7HL46 Cluster: Threonyl/alanyl tRNA synthetase SAD; n=...    33   4.2  
UniRef50_Q2RZF5 Cluster: HD domain protein, putative; n=2; Salin...    33   5.6  
UniRef50_A7D011 Cluster: Undecaprenyl-diphosphatase precursor; n...    33   7.4  
UniRef50_A4SZF1 Cluster: Putative uncharacterized protein precur...    33   7.4  
UniRef50_Q2U8Y6 Cluster: UDP-N-acetylglucosamine enolpyruvyl tra...    33   7.4  
UniRef50_UPI00006CD8E0 Cluster: hypothetical protein TTHERM_0052...    32   9.8  

>UniRef50_Q82D04 Cluster: Putative secreted protein; n=2;
           Streptomyces|Rep: Putative secreted protein -
           Streptomyces avermitilis
          Length = 464

 Score = 36.3 bits (80), Expect = 0.60
 Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = +3

Query: 264 TLKNVNG--PLNVFHETIDVVSAIIMGKAYATSLPPITVE-ALGIIIPKVPQLIVDAVKL 434
           TL N+ G  PL + H TI V +      A   ++  +T + A  +I+P   Q++ DAV++
Sbjct: 120 TLSNLFGQQPLTITHATIAVAATANSAAASTGTMRRLTFDGATSVIVPAGQQVLSDAVRV 179

Query: 435 VVHGETDVEPIISIMNGAPTWP 500
            +  ++DV  +++  +  P+ P
Sbjct: 180 TIPHDSDV--LVTTYSPTPSGP 199


>UniRef50_Q7RP46 Cluster: Putative uncharacterized protein PY01615;
           n=8; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01615 - Plasmodium yoelii yoelii
          Length = 1647

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 17/91 (18%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
 Frame = -3

Query: 443 VHNEFDGVNNQLWHFRYDDSKSFDCDRRQACCV--SFAHDNSRDHVNCLMKYIQRTVHVF 270
           ++N F G+NN +++  ++ +K++  + R  C +  +F +D   D    +     + +H  
Sbjct: 13  MNNNFSGLNNHIYNTHFNRNKNYFQNNRNNCDIYNTFYNDEVNDFNEPISHGYDQYMHKN 72

Query: 269 QSMFNFNQVTSVMSNMPQSKTSKNRRPSFTL 177
           ++  N N+ T  + +M Q  +   ++  + +
Sbjct: 73  KTYDNINKKTCALISMGQKGSKPEKKELYNI 103


>UniRef50_Q01C13 Cluster: Homology to unknown gene; n=2;
           Ostreococcus|Rep: Homology to unknown gene -
           Ostreococcus tauri
          Length = 368

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +3

Query: 246 LVEIKHTLKNVNGPLNVFHETIDVVSAIIMGKAYATSLPPITVEALGIIIPKVPQLIVDA 425
           L ++ H    V  PLN +   I+ +  +   KA+A S   ITV  +G +IP++  L  DA
Sbjct: 98  LEQLAHA-NRVAAPLNNYDSVIEAIGVMTDDKAFALSASKITVSTVG-VIPRMRTLTRDA 155


>UniRef50_A7HL46 Cluster: Threonyl/alanyl tRNA synthetase SAD; n=1;
           Fervidobacterium nodosum Rt17-B1|Rep: Threonyl/alanyl
           tRNA synthetase SAD - Fervidobacterium nodosum Rt17-B1
          Length = 373

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 33/125 (26%), Positives = 58/125 (46%)
 Frame = +3

Query: 141 VWS*KLTEELAFECETRPAILGRFRLWHIRHN*RNLVEIKHTLKNVNGPLNVFHETIDVV 320
           V S K TEE       +P  LG + +  I  N R  +  +HT +++     +    I+ V
Sbjct: 53  VLSVKETEEWIIHELDKPIELGIYEV-QIDENRRKDIAQQHTGQHILSAAFIHVAEIETV 111

Query: 321 SAIIMGKAYATSLPPITVEALGIIIPKVPQLIVDAVKLVVHGETDVEPIISIMNGAPTWP 500
               MG+ Y+T    I ++ +  I P V   + +    ++     +E II+ +NGA T+P
Sbjct: 112 G-FHMGEEYST----IDLD-IPYIEPDVLNEVEELSNQIIQSNIQIEEIITDVNGANTYP 165

Query: 501 CSKQV 515
             K++
Sbjct: 166 LRKKL 170


>UniRef50_Q2RZF5 Cluster: HD domain protein, putative; n=2;
           Salinibacter ruber DSM 13855|Rep: HD domain protein,
           putative - Salinibacter ruber (strain DSM 13855)
          Length = 316

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 13/56 (23%), Positives = 27/56 (48%)
 Frame = +3

Query: 327 IIMGKAYATSLPPITVEALGIIIPKVPQLIVDAVKLVVHGETDVEPIISIMNGAPT 494
           ++   A+    P +  + L +  P +P  I    + +  G+TD +P+I I+   P+
Sbjct: 23  LLASSAHQLRTPSVQKQGLTLTFPTLPSTISKVEEFIASGQTDPDPLIDIVEHDPS 78


>UniRef50_A7D011 Cluster: Undecaprenyl-diphosphatase precursor; n=1;
           Opitutaceae bacterium TAV2|Rep:
           Undecaprenyl-diphosphatase precursor - Opitutaceae
           bacterium TAV2
          Length = 345

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
 Frame = +3

Query: 309 IDVVSAIIMGKAYATS-LPPITVEALGIIIPKVPQLIVDAVKL-VVHGETDVEPIIS 473
           + ++ +I    A+ATS +PP+ V +     P VP  ++DAV L VV G T+  PI S
Sbjct: 12  LSLILSIGAAAAHATSAVPPVAVSSPPPPPPPVPPDVIDAVVLGVVEGVTEFLPISS 68


>UniRef50_A4SZF1 Cluster: Putative uncharacterized protein
           precursor; n=1; Polynucleobacter sp. QLW-P1DMWA-1|Rep:
           Putative uncharacterized protein precursor -
           Polynucleobacter sp. QLW-P1DMWA-1
          Length = 125

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -3

Query: 488 CAIHYAYYWFYICFAVHNEFDGVNNQLWHFRYDDS 384
           CA+ +A+ +FY+   ++N  D  NN+L+H+ +  S
Sbjct: 72  CAVLFAFTFFYLTGKINNAKDSGNNRLFHWLHGSS 106


>UniRef50_Q2U8Y6 Cluster: UDP-N-acetylglucosamine enolpyruvyl
           transferase; n=2; Aspergillus|Rep:
           UDP-N-acetylglucosamine enolpyruvyl transferase -
           Aspergillus oryzae
          Length = 749

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 339 CP***PRPRQLSHEIHSEDRSRFSEYV*FQPSYVSYVEYATI 214
           CP   P P    H++HS    RFS  +  QP+++SY+ Y  +
Sbjct: 453 CP---PVPGLRPHDMHSISNDRFSFLLLCQPTFISYIAYCKL 491


>UniRef50_UPI00006CD8E0 Cluster: hypothetical protein
           TTHERM_00522740; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00522740 - Tetrahymena
           thermophila SB210
          Length = 1715

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -3

Query: 350 CVSFAHDNSRDHVNCLMKYIQRTVHVFQSMFNFNQVTSVMSNMPQSKTSK 201
           C+ F  +N    +N L  + Q T+H+FQ+M +  ++ S  S  P    S+
Sbjct: 856 CIKFLEEN----INILSSFEQPTIHLFQAMLSHQKLVSNPSKNPDQTNSE 901


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,505,953
Number of Sequences: 1657284
Number of extensions: 10583835
Number of successful extensions: 31406
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31395
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)