Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1001
         (628 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023929-1|ABB36433.1|  352|Drosophila melanogaster RE60807p pro...    28   9.0  
AY058574-1|AAL13803.1|  654|Drosophila melanogaster LD26912p pro...    28   9.0  
AL023874-4|CAA19648.1|  352|Drosophila melanogaster EG:100G10.3 ...    28   9.0  
AJ344147-1|CAC82992.1|  352|Drosophila melanogaster eIF2B-beta p...    28   9.0  
AF289101-1|AAG38015.1|  352|Drosophila melanogaster eukaryotic i...    28   9.0  
AF145608-1|AAD38583.1|  674|Drosophila melanogaster BcDNA.GH0275...    28   9.0  
AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-P...    28   9.0  
AE014298-446|AAF45809.1|  352|Drosophila melanogaster CG2677-PA ...    28   9.0  
AE014296-2635|AAF49538.2|  654|Drosophila melanogaster CG5222-PA...    28   9.0  

>BT023929-1|ABB36433.1|  352|Drosophila melanogaster RE60807p
           protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
 Frame = +3

Query: 240 RNLVEIKHTLKN--VNGPLNVFHETIDVVSAIIMGKAY--ATSLPPITVEALGIIIPKVP 407
           + + ++ H +K   V G  N+ ++T+D+   IIM K++  A +L  I  +   I+   +P
Sbjct: 7   KEITQLIHAIKVGLVEGSYNITNKTLDIFKYIIMSKSWQNADALMQIVRDQCKILQAALP 66

Query: 408 Q 410
           Q
Sbjct: 67  Q 67


>AY058574-1|AAL13803.1|  654|Drosophila melanogaster LD26912p
           protein.
          Length = 654

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 419 NNQLWHFRYDDSKSFDCDRRQACCVSFAHDNSR 321
           NN+L H+ +  S+ F  D RQ C V   H + R
Sbjct: 369 NNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLR 401


>AL023874-4|CAA19648.1|  352|Drosophila melanogaster EG:100G10.3
           protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
 Frame = +3

Query: 240 RNLVEIKHTLKN--VNGPLNVFHETIDVVSAIIMGKAY--ATSLPPITVEALGIIIPKVP 407
           + + ++ H +K   V G  N+ ++T+D+   IIM K++  A +L  I  +   I+   +P
Sbjct: 7   KEITQLIHAIKVGLVEGSYNITNKTLDIFKYIIMSKSWQNADALMQIVRDQCKILQAALP 66

Query: 408 Q 410
           Q
Sbjct: 67  Q 67


>AJ344147-1|CAC82992.1|  352|Drosophila melanogaster eIF2B-beta
           protein protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
 Frame = +3

Query: 240 RNLVEIKHTLKN--VNGPLNVFHETIDVVSAIIMGKAY--ATSLPPITVEALGIIIPKVP 407
           + + ++ H +K   V G  N+ ++T+D+   IIM K++  A +L  I  +   I+   +P
Sbjct: 7   KEITQLIHAIKVGLVEGSYNITNKTLDIFKYIIMSKSWQNADALMQIVRDQCKILQAALP 66

Query: 408 Q 410
           Q
Sbjct: 67  Q 67


>AF289101-1|AAG38015.1|  352|Drosophila melanogaster eukaryotic
           initiation factor eIF2Bbeta subunit protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
 Frame = +3

Query: 240 RNLVEIKHTLKN--VNGPLNVFHETIDVVSAIIMGKAY--ATSLPPITVEALGIIIPKVP 407
           + + ++ H +K   V G  N+ ++T+D+   IIM K++  A +L  I  +   I+   +P
Sbjct: 7   KEITQLIHAIKVGLVEGSYNITNKTLDIFKYIIMSKSWQNADALMQIVRDQCKILQAALP 66

Query: 408 Q 410
           Q
Sbjct: 67  Q 67


>AF145608-1|AAD38583.1|  674|Drosophila melanogaster BcDNA.GH02751
           protein.
          Length = 674

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = -2

Query: 309 LSHEIHSEDRSRFSEYV*FQPSYVS--YVEYATI*NVQESQAEFHTQTQAPL 160
           LSHE++ +D+ +++E +  Q +YV   Y++  T    Q ++A+  T +   L
Sbjct: 186 LSHEMNCKDQEQYNELIRTQTNYVGSRYLKPGTPPTFQRAKAQSATSSSCSL 237


>AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-PA
            protein.
          Length = 1513

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = -2

Query: 309  LSHEIHSEDRSRFSEYV*FQPSYVS--YVEYATI*NVQESQAEFHTQTQAPL 160
            LSHE++ +D+ +++E +  Q +YV   Y++  T    Q ++A+  T +   L
Sbjct: 1025 LSHEMNCKDQEQYNELIRTQTNYVGSRYLKPGTPPTFQRAKAQSATSSSCSL 1076


>AE014298-446|AAF45809.1|  352|Drosophila melanogaster CG2677-PA
           protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
 Frame = +3

Query: 240 RNLVEIKHTLKN--VNGPLNVFHETIDVVSAIIMGKAY--ATSLPPITVEALGIIIPKVP 407
           + + ++ H +K   V G  N+ ++T+D+   IIM K++  A +L  I  +   I+   +P
Sbjct: 7   KEITQLIHAIKVGLVEGSYNITNKTLDIFKYIIMSKSWQNADALMQIVRDQCKILQAALP 66

Query: 408 Q 410
           Q
Sbjct: 67  Q 67


>AE014296-2635|AAF49538.2|  654|Drosophila melanogaster CG5222-PA
           protein.
          Length = 654

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 419 NNQLWHFRYDDSKSFDCDRRQACCVSFAHDNSR 321
           NN+L H+ +  S+ F  D RQ C V   H + R
Sbjct: 369 NNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLR 401


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,706,601
Number of Sequences: 53049
Number of extensions: 492291
Number of successful extensions: 1383
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1383
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)