Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0998
(600 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 97 1e-20
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 52 4e-07
06_01_0671 - 4899611-4899829,4900870-4901448 50 2e-06
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 44 7e-05
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 43 2e-04
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 35 0.057
01_03_0105 + 12604125-12604583 33 0.13
07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893 31 0.70
03_03_0101 - 14431327-14432390,14432599-14432731 31 0.70
05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524 30 1.6
01_06_0448 + 29462920-29463052,29463220-29463349,29463608-294637... 30 1.6
01_05_0267 - 20237001-20237802,20238257-20238386,20238679-20238820 30 1.6
01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496 30 1.6
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 29 2.2
09_04_0567 + 18585556-18586113 29 2.8
03_05_0276 + 22646416-22646760,22646858-22647090,22647184-226472... 29 3.8
02_03_0183 + 16106205-16106474 28 5.0
07_03_1139 + 24254662-24255306 28 6.6
02_04_0625 - 24547435-24547569,24547674-24547742,24547871-245479... 28 6.6
01_07_0178 + 41810795-41811409 28 6.6
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 27 8.7
10_07_0187 - 13919143-13919901 27 8.7
09_02_0245 - 6198271-6198437,6198496-6198559,6199011-6199259,619... 27 8.7
08_01_0839 + 8210084-8210341,8210499-8210582,8211345-8211461,821... 27 8.7
07_03_1461 - 26700613-26700621,26700784-26700851,26701778-267019... 27 8.7
07_01_0478 - 3605306-3605614,3605766-3605906 27 8.7
01_07_0192 - 41888998-41890632 27 8.7
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 27 8.7
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 96.7 bits (230), Expect = 1e-20
Identities = 44/86 (51%), Positives = 62/86 (72%)
Frame = +1
Query: 253 RSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQN 432
++ F+HLAW+ T RK GGLG + PLISD + IS+ +GVL + GI RGLFIID +
Sbjct: 209 KTTFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGV 268
Query: 433 LRQITINDLPVGRSVEETLRLVQAFR 510
++ TIN+L +GRSV+ET+R +QA +
Sbjct: 269 IQHSTINNLAIGRSVDETMRTLQALQ 294
Score = 91.1 bits (216), Expect = 6e-19
Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = +2
Query: 56 APQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGC 232
AP F A AV + EF ++ LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ DEF K+
Sbjct: 74 APDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNT 133
Query: 233 EVLG 244
E+LG
Sbjct: 134 EILG 137
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 516 DKHGEVCPANWRPGAKTIKPDTK 584
D EVCPA W+PG K++KPD K
Sbjct: 298 DNPDEVCPAGWKPGDKSMKPDPK 320
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +1
Query: 367 GVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFR 510
GV + GI RGLFIID + ++ TIN+L +GRSV+ETLR +QA +
Sbjct: 73 GVSIDSVGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 120
Score = 37.5 bits (83), Expect = 0.008
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 528 EVCPANWRPGAKTIKPDTK 584
EVCPA W+PG K++KPD K
Sbjct: 128 EVCPAGWKPGEKSMKPDPK 146
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 167 FVCPTEIIAFSEKADEFRKIGCEVLG 244
FV EI AFS++ +EF KI EVLG
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLG 73
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 104 ISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLG 244
+SLS +KG+ VV++FYP D T C + AF + ++F+K G EV+G
Sbjct: 137 VSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIG 183
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 104 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLG 244
I + D+ G YV+LF +P DFT VC TE+ A + A EF K G ++LG
Sbjct: 57 IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLG 104
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 104 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLG 244
I L D+ G YV++F +P DFT VC TE+ + A EF K G ++LG
Sbjct: 22 IRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLG 69
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -1
Query: 486 GLLHRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVARDAVRLVAYQRNVHGTE 307
G+L +G+VVD L + ++DD E +L +H AR +R + R+V G
Sbjct: 841 GVLESNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHD-AARHVLRALRQHRDVGGDT 899
Query: 306 SALLARR 286
+ ++RR
Sbjct: 900 AGAVSRR 906
>01_03_0105 + 12604125-12604583
Length = 152
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 312 SHEHSSDKRQVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQRPA 461
SH+H Q +P ++LR GR DG H RRQ Q + +PA
Sbjct: 62 SHQHKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQPSLQKEAAAKPA 111
>07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893
Length = 342
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 400 GRGCPSPRPALRSRERCGATCRL 332
G GC S P L ERCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>03_03_0101 - 14431327-14432390,14432599-14432731
Length = 398
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 400 GRGCPSPRPALRSRERCGATCRL 332
G GC S P L ERCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524
Length = 427
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 400 GRGCPSPRPALRSRERCGATCRL 332
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>01_06_0448 +
29462920-29463052,29463220-29463349,29463608-29463732,
29463923-29464458
Length = 307
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 400 GRGCPSPRPALRSRERCGATCRL 332
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPRLAGLQRCGKSCRL 55
>01_05_0267 - 20237001-20237802,20238257-20238386,20238679-20238820
Length = 357
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 400 GRGCPSPRPALRSRERCGATCRL 332
G GC S P L ERCG +CRL
Sbjct: 36 GVGCWSSVPKLAGLERCGKSCRL 58
>01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496
Length = 428
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 400 GRGCPSPRPALRSRERCGATCRL 332
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSTVPKLAGLQRCGKSCRL 55
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 292 RKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 450
+K+ G G N+P D R ++DY +DE+ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>09_04_0567 + 18585556-18586113
Length = 185
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -1
Query: 318 HGTESALLARRVDPGEVR--EVRAVEAPSTSQPILRNSSAFSENAIISVGHTNV 163
H E L+RRVD G R VRA+ + P+L + + ++ V HT V
Sbjct: 38 HILEVHTLSRRVDAGSGRIDAVRAIAGRAPPLPLLLRGLVAAADVVLCVEHTTV 91
>03_05_0276 +
22646416-22646760,22646858-22647090,22647184-22647259,
22647383-22647459,22647559-22647592,22647699-22647848,
22647935-22648069,22648156-22648227
Length = 373
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 438 PEVLLVVDDEESSEGDARLLVQHS 367
P V++VVDD+E EGD +L ++
Sbjct: 81 PAVVVVVDDDEEGEGDPQLCAPYA 104
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 325 PLISDKSHRISRDYGVLDEETGIP 396
PL S HR SR +G L E +G P
Sbjct: 59 PLASSHEHRFSRLHGCLPESSGFP 82
>07_03_1139 + 24254662-24255306
Length = 214
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 9/70 (12%)
Frame = +3
Query: 279 DQHAAQAGRTRSHEHSSDKRQVAPHL---------SRLRSAGRGDGHPLPRTLHHRRQAE 431
D A +T H D PHL S L +AG P P HHR ++
Sbjct: 140 DSSALCCPKTPPPAHRPDPATAVPHLPPLGRDPSPSPLPTAGENSTSPTPEREHHRGESP 199
Query: 432 PQADHHQRPA 461
A +RPA
Sbjct: 200 ADAFLARRPA 209
>02_04_0625 -
24547435-24547569,24547674-24547742,24547871-24547997,
24548086-24548209,24548714-24548832,24548953-24549044,
24549124-24549329,24549429-24549534,24549636-24549740,
24549836-24549942,24550030-24550253,24550341-24550468,
24550945-24551022,24551338-24552012,24552655-24552798,
24552985-24553064,24553958-24554029,24554124-24554343,
24554460-24554590,24555118-24555243,24555567-24555695,
24556156-24556318,24556408-24556545,24557198-24557317,
24557521-24557682,24557751-24557876,24558172-24558342,
24558435-24558590,24559061-24559408
Length = 1526
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = -1
Query: 414 DEESSEGDARLLVQHSVVARDAVRLVAYQRNVHGTESALLARRVDPGEVREVRAVEAPST 235
+EE E + L H V D VR ++ + E L RVD ++ EVR + S+
Sbjct: 340 EEECDEDSLKFL--HKAV--DTVRKQVIRKRI--IEKGL---RVDGRQLDEVRPLYCESS 390
Query: 234 SQPILRNSSAFS 199
+ PIL S+ FS
Sbjct: 391 TYPILHGSALFS 402
>01_07_0178 + 41810795-41811409
Length = 204
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = -1
Query: 534 TPRRACP*TEGLHQPQGLLHRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVAR 355
TPR P + + +L R HG+ D +L V + + E+ G+ L+ V
Sbjct: 73 TPRSVLPAEISRRELEAVLRRLGHGEPDDEELDAVAAIAAEAEAGGGEDELMEAFKVFDA 132
Query: 354 D 352
D
Sbjct: 133 D 133
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 387 GHPLPRTLHHRRQAEPQADHH 449
G PL R+LH +Q P A HH
Sbjct: 481 GAPLQRSLHVSQQQMPSAQHH 501
>10_07_0187 - 13919143-13919901
Length = 252
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 417 DDEESSEGDARLLVQHSVVAR 355
DDEE GDA +L H +VAR
Sbjct: 188 DDEELLRGDAAMLPPHEMVAR 208
>09_02_0245 -
6198271-6198437,6198496-6198559,6199011-6199259,
6199796-6199864,6199956-6200006,6200967-6201014,
6201175-6201255,6202793-6202831,6203045-6203128,
6204524-6204728,6205041-6205143,6205224-6205353,
6206059-6206250
Length = 493
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 336 RQVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQAD 443
RQ AP L+ +A G+G+P P + + PQ D
Sbjct: 48 RQSAPELTAATTATEGEGNPTPTKKNIQEIPTPQFD 83
>08_01_0839 +
8210084-8210341,8210499-8210582,8211345-8211461,
8211850-8211945,8212164-8212427,8212522-8212704
Length = 333
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 516 DKHGEVCPANWRPGAKTIKPDTKAR 590
DKHG +CP +P + T+ + + R
Sbjct: 285 DKHGHICPVTCQPVSSTVLRNERIR 309
>07_03_1461 -
26700613-26700621,26700784-26700851,26701778-26701919,
26702011-26702318,26702415-26702481,26702543-26702664,
26702763-26702815,26702924-26703006,26703092-26703160,
26703235-26703633
Length = 439
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 279 DQHAAQAGRTRSHEHSSDKRQ-VAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQR 455
+Q A + R + + + Q +A L+R + G G P PRT H+ + Q
Sbjct: 305 EQSAMRQSRPQELSNGQTREQFIAAMLARPSNPESGPGRPQPRTKQHQDASPAQGRSQPM 364
Query: 456 PA 461
P+
Sbjct: 365 PS 366
>07_01_0478 - 3605306-3605614,3605766-3605906
Length = 149
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 375 GRGDGHPLPRTLHHR 419
G DGH LPRTL HR
Sbjct: 4 GGDDGHGLPRTLSHR 18
>01_07_0192 - 41888998-41890632
Length = 544
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 309 RSHEHSSDKRQVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQA 440
R HE S R P + G GDG+ R +H+ A +A
Sbjct: 351 RVHEEVSSSRHADPRRADAGEDGHGDGYDELRRMHYLHAAISEA 394
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 387 GHPLPRTLHHRRQAEPQADHHQR 455
G P+PR H+R + Q+ H QR
Sbjct: 651 GQPIPRRRHNRGNRKAQSSHKQR 673
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,624,962
Number of Sequences: 37544
Number of extensions: 302517
Number of successful extensions: 1259
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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