Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0998
(600 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 99 2e-21
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 98 4e-21
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 54 1e-07
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 41 7e-04
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 32 0.33
At1g57560.1 68414.m06531 myb family transcription factor (MYB50)... 31 0.58
At5g26660.1 68418.m03174 myb family transcription factor (MYB4) ... 30 1.3
At3g57570.1 68416.m06410 expressed protein 30 1.3
At1g09540.1 68414.m01070 myb family transcription factor (MYB61)... 30 1.3
At1g80910.1 68414.m09493 expressed protein 29 2.4
At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit (... 28 4.1
At3g62170.1 68416.m06985 pectinesterase family protein contains ... 28 4.1
At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, ... 28 4.1
At5g48690.1 68418.m06025 hypothetical protein 28 5.4
At5g25070.1 68418.m02971 expressed protein 28 5.4
At4g16146.1 68417.m02449 expressed protein 28 5.4
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 28 5.4
At5g13750.2 68418.m01601 transporter-related 27 7.2
At5g13750.1 68418.m01600 transporter-related 27 7.2
At4g01680.1 68417.m00218 myb family transcription factor (MYB55) 27 7.2
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 27 9.5
At4g28395.1 68417.m04064 lipid transfer protein, putative identi... 27 9.5
At4g18570.1 68417.m02749 proline-rich family protein common fami... 27 9.5
At1g16020.2 68414.m01922 expressed protein 27 9.5
At1g16020.1 68414.m01921 expressed protein 27 9.5
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/85 (54%), Positives = 62/85 (72%)
Frame = +1
Query: 256 SHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNL 435
S F+HLAW+ T RK GGLG +N PLISD + IS+ +GVL + GI RGLFIID + +
Sbjct: 147 SVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIALRGLFIIDKEGVI 206
Query: 436 RQITINDLPVGRSVEETLRLVQAFR 510
+ TIN+L +GRSV+ET+R +QA +
Sbjct: 207 QHSTINNLGIGRSVDETMRTLQALQ 231
Score = 89.8 bits (213), Expect = 1e-18
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = +2
Query: 32 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 208
+PL K AP F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 72 LPLVGNK-APDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRH 130
Query: 209 DEFRKIGCEVLG 244
EF K+ EVLG
Sbjct: 131 SEFEKLNTEVLG 142
Score = 37.5 bits (83), Expect = 0.007
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 528 EVCPANWRPGAKTIKPDTK 584
EVCPA W+PG K++KPD K
Sbjct: 239 EVCPAGWKPGEKSMKPDPK 257
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 97.9 bits (233), Expect = 4e-21
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = +1
Query: 256 SHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNL 435
S F+HLAW+ T RK GGLG +N PL+SD + IS+ +GVL + GI RGLFIID + +
Sbjct: 154 SVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQGIALRGLFIIDKEGVI 213
Query: 436 RQITINDLPVGRSVEETLRLVQAFR 510
+ TIN+L +GRSV+ET+R +QA +
Sbjct: 214 QHSTINNLGIGRSVDETMRTLQALQ 238
Score = 89.0 bits (211), Expect = 2e-18
Identities = 44/72 (61%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Frame = +2
Query: 32 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 208
+PL K AP F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 79 LPLVGNK-APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 137
Query: 209 DEFRKIGCEVLG 244
+EF K+ EVLG
Sbjct: 138 EEFEKLNTEVLG 149
Score = 37.5 bits (83), Expect = 0.007
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 528 EVCPANWRPGAKTIKPDTK 584
EVCPA W+PG K++KPD K
Sbjct: 246 EVCPAGWKPGEKSMKPDPK 264
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +2
Query: 98 KDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLG 244
K +SL YKGK VVL+FYP D T C + AF + ++F+K G EV+G
Sbjct: 86 KPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIG 134
Score = 33.9 bits (74), Expect = 0.083
Identities = 16/60 (26%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 328 LISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQA 504
L+SD+ +++ +D+GV + G +P R +++D ++ I N + ++ETL+ ++A
Sbjct: 156 LLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLKA 215
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 40.7 bits (91), Expect = 7e-04
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 110 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLG 244
L DY + VLF +P DFT VC TE+ A ++ A EF K G ++LG
Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLG 69
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +1
Query: 265 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 444
+H WI +N P+I+D + I ++D P R L I+ ++
Sbjct: 77 SHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRALHIVGPDSKIKLS 136
Query: 445 TINDLPVGRSVEETLRLVQA 504
+ GR+++E LR + +
Sbjct: 137 FLYPSTTGRNMDEVLRALDS 156
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 83 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE 235
V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+ G +
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGID 110
>At1g57560.1 68414.m06531 myb family transcription factor (MYB50)
similar to DNA-binding protein GI:19058 from [Hordeum
vulgare]
Length = 314
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 400 GRGCPSPRPALRSRERCGATCRL 332
G GC S P L ERCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>At5g26660.1 68418.m03174 myb family transcription factor (MYB4)
(MYB86) contains Pfam profile: PF00249 myb-like
DNA-binding domain; identical to cDNA putative
transcription factor (MYB86) mRNA, partial cds
GI:3941517
Length = 352
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 400 GRGCPSPRPALRSRERCGATCRL 332
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>At3g57570.1 68416.m06410 expressed protein
Length = 1057
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -2
Query: 521 LVRERKACTSRRVSSTDLPTGRSLMVICLRFCLSSMMKSPRKGMPVSSSST 369
L+ +R C+S STD+ T + + I R C+++++ S + P SS T
Sbjct: 886 LIEDRSNCSSIPKLSTDILTCENPLPIPFRLCMANVIISACQKNPESSKKT 936
>At1g09540.1 68414.m01070 myb family transcription factor (MYB61)
contains PFAM profile: myb DNA-binding domain PF00249
Length = 366
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 400 GRGCPSPRPALRSRERCGATCRL 332
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Frame = +2
Query: 101 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVL 241
D+ ++G+ + +LFFYP D TF +I SE F ++ CEV+
Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVI 72
>At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit
(Ath-A) identical to gi:2827141
Length = 1084
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 384 DGHPLPRTLHHRRQAEPQADHHQR 455
DG+ LPR ++ R+ P DHH++
Sbjct: 516 DGNELPRLVYVSREKRPGFDHHKK 539
>At3g62170.1 68416.m06985 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase, PF04043 plant
invertase/pectin methylesterase inhibitor ;similar to
pollen-specific pectin esterase GI:1620652 from
[Brassica rapa subsp. pekinensis]
Length = 588
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 136 NIFPLVVRQRNVLELSVDDGRGLELGSGFGHLQRHLVETKD 14
+IF VV + + VDD + + +G+G G R L+E D
Sbjct: 192 DIFHSVVTAMAQMGVKVDDMKNITMGAGAGGAARRLLEDND 232
>At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit, Arabidopsis thaliana (Ath-A)
Length = 1088
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 384 DGHPLPRTLHHRRQAEPQADHHQR 455
DG+ LPR ++ R+ P DHH++
Sbjct: 521 DGNELPRLVYVSREKRPGFDHHKK 544
>At5g48690.1 68418.m06025 hypothetical protein
Length = 301
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 232 AADLAELVRLLRERDNLRRAHEREVQRI 149
A +L+E R LRE +R ERE +RI
Sbjct: 65 AKELSEQARKLREEQETKREREREKERI 92
>At5g25070.1 68418.m02971 expressed protein
Length = 736
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = -3
Query: 241 EHLAADLAELVRLLRERDNLRRAHEREVQRIEEQHN 134
EHLA +L EL+ L++ ++ ++ +++ +EE+ N
Sbjct: 387 EHLANELEELLALVKAKEKEIDENDSQIEAVEERIN 422
>At4g16146.1 68417.m02449 expressed protein
Length = 102
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 295 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGIPFRGLFIID 420
K GGL P PLIS S R S D+ +L +E I R + I+
Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIE 69
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +3
Query: 303 RTRSHEHSSDKRQVAP-HLSRLRSAGRGDGHPLPRTLHHRRQAEP----QADHHQR 455
R R+H H+ +RQ P +R +AG+ HHRR Q HH+R
Sbjct: 77 RRRNHHHNDHRRQPPPLPENRAATAGQPPSPSPDNHRHHRRTTTAAVAGQPPHHRR 132
>At5g13750.2 68418.m01601 transporter-related
Length = 392
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +1
Query: 247 LHRSHFTHL--AWINTPRKQGGLG 312
LH +T + W N+PRK GGLG
Sbjct: 202 LHDMAYTEIFSLWANSPRKYGGLG 225
>At5g13750.1 68418.m01600 transporter-related
Length = 478
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +1
Query: 247 LHRSHFTHL--AWINTPRKQGGLG 312
LH +T + W N+PRK GGLG
Sbjct: 288 LHDMAYTEIFSLWANSPRKYGGLG 311
>At4g01680.1 68417.m00218 myb family transcription factor (MYB55)
Length = 336
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 400 GRGCPSPRPALRSRERCGATCRL 332
G GC S P +RCG +CRL
Sbjct: 33 GHGCWSSVPKQAGLQRCGKSCRL 55
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 384 DGHPLPRTLHHRRQAEPQADHHQR 455
+GH LPR ++ R+ P HH++
Sbjct: 477 EGHELPRLVYVSREKRPGFQHHKK 500
>At4g28395.1 68417.m04064 lipid transfer protein, putative identical
to anther-specific gene ATA7 [gi:2746339]; contains Pfam
protease inhibitor/seed storage/LTP family domain
Length = 180
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 353 MRCDLSLIRGMFMGPSPPCLRGV 285
M C + + G+F PSP C RGV
Sbjct: 77 MPC-MGFVEGIFQQPSPDCCRGV 98
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 235 LAADLAELVRLLRERDNLRRAHEREVQRIEEQHNIFPLVVRQ 110
+ ++L V LRER+ L + EV+ + E ++ PL+ Q
Sbjct: 86 VVSELRRQVEELREREALLKTENLEVKLLRESVSVIPLLESQ 127
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +2
Query: 137 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVL 241
+LFFYP D F +I SE F ++ CEV+
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVI 70
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +2
Query: 137 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVL 241
+LFFYP D F +I SE F ++ CEV+
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVI 70
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,058,511
Number of Sequences: 28952
Number of extensions: 217043
Number of successful extensions: 848
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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