Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0997
(540 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0586 + 15782645-15782721,15782781-15783405 32 0.34
09_02_0036 + 3217163-3217584,3217752-3218322 30 1.0
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 30 1.0
07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343 29 1.8
03_02_0171 + 6126685-6127107,6127237-6127581,6127701-6127997,612... 29 1.8
09_03_0087 - 12237226-12237346,12237423-12237555,12237641-122377... 29 3.1
08_02_1483 - 27451391-27451794,27451883-27452387 29 3.1
04_01_0332 + 4378111-4378329,4378862-4378997,4379113-4379165,437... 29 3.1
01_07_0291 + 42555233-42555444,42556515-42556550,42556652-425567... 29 3.1
02_04_0618 - 24428987-24429331,24429946-24430387,24433358-24433434 28 4.1
01_06_0061 - 26071984-26072343,26072792-26073139,26073228-260733... 28 4.1
12_01_0541 + 4251931-4254141 28 5.5
07_01_0694 - 5248381-5249118 27 7.2
04_03_0742 + 19200045-19200053,19200158-19200437,19201331-192015... 27 7.2
04_01_0312 + 4206400-4206627,4206661-4207269,4207425-4207902,420... 27 7.2
12_01_0319 + 2440129-2440661,2440875-2440902 27 9.6
11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371 27 9.6
08_01_0265 + 2148255-2150219,2150735-2150812 27 9.6
04_04_1668 + 35217254-35218531 27 9.6
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 27 9.6
03_06_0765 + 36104604-36105689 27 9.6
01_07_0161 + 41574749-41576044 27 9.6
01_05_0712 - 24531654-24531874,24532438-24532538,24532621-245327... 27 9.6
01_02_0130 - 11424904-11425142,11425295-11425416,11425461-114255... 27 9.6
01_01_1174 + 9348256-9349734 27 9.6
>05_03_0586 + 15782645-15782721,15782781-15783405
Length = 233
Score = 31.9 bits (69), Expect = 0.34
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -2
Query: 347 RMSSPCRACSKYPRKVSSGSLPA--ITTSTLSPELRSARRW*WCRSGGEV 204
R ++P A + R+ G P + STL PE R W W R GG V
Sbjct: 14 RRAAPATAAGR--RRYGGGGQPVSDLAASTLDPEGEGQREWSWRRRGGGV 61
>09_02_0036 + 3217163-3217584,3217752-3218322
Length = 330
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 405 ITIHWPSFYNVV-TGKTLALPNLIALQH 485
I+ W F N+V +G TL++PN + LQH
Sbjct: 69 ISAGWSRFINLVQSGPTLSIPNYVLLQH 96
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 540 GRAIGAGLFAIRQLAKGGCAARRL 469
G A G GL RQL++GGC +RL
Sbjct: 89 GDANGRGLLLARQLSRGGCGEQRL 112
>07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343
Length = 229
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 181 PQHNATAQTSPPLLHHHHRRAERSSGDSVEVVIAGKLPED-TLRGYLLQARQGDD 342
P +A PP HHHH+ G EV GK+ + L+ +L+ QG++
Sbjct: 175 PASSAGYAQPPPPHHHHHQMVMGGKGKVEEVQSKGKIRDFLQLQASMLELIQGEN 229
>03_02_0171 +
6126685-6127107,6127237-6127581,6127701-6127997,
6129763-6129990,6130716-6131036
Length = 537
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 163 ACRDMMPQHNATAQTSPPLLHHHHRRAERSSGDSVEVVIAG 285
A RD H + T P HHHH + + + ++V +G
Sbjct: 327 ASRDTAASHGRSRHTVAPEKHHHHHQQHKIMSEECKMVGSG 367
>09_03_0087 -
12237226-12237346,12237423-12237555,12237641-12237730,
12238992-12239198,12239738-12239813,12240019-12240148,
12241024-12241121
Length = 284
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +3
Query: 327 PAGRRHSRDFLARGGARY--PIRPIVSRITIH-WPSFYNVVTGKTLALPNLIALQH 485
PA HSR + + GG++Y P+R + P Y VV L L+ H
Sbjct: 36 PARSNHSRGYSSEGGSKYNRPMRQFAEENEANPQPLIYYVVPSALLVFAGLVTFVH 91
>08_02_1483 - 27451391-27451794,27451883-27452387
Length = 302
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2
Query: 428 KRRPVNCNTTHYRANWVPGPPSSEKVPRMSSPCRACSKYPRKVSSGSLPAITTSTLSPE 252
K R +C TH ++ WVP E+ ++S + SK PR S+ + + T +T S E
Sbjct: 115 KSRGFDC-ATHVKSTWVPAAKRRERQNLLASAAES-SKRPRD-SAAAATSTTPTTSSGE 170
>04_01_0332 +
4378111-4378329,4378862-4378997,4379113-4379165,
4379286-4379394,4379467-4379603,4379698-4379894,
4379979-4380128,4380233-4380293,4380380-4380500,
4380901-4380991,4381116-4381209,4381446-4381541,
4382176-4382316,4382592-4382642,4383093-4383161,
4384072-4384142,4384244-4384336,4384820-4384910,
4386164-4386235,4387226-4387351,4387537-4387593,
4387926-4388000,4388570-4388658,4388814-4388891,
4389308-4389446,4389868-4389977,4390151-4390250,
4390548-4390655
Length = 977
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 235 RRAERSSGDSVEVVIAGKLPEDTLRGYLLQARQGDDILGTFSLEGGP 375
RR + D +++ +AG L + LR + +A++G DI ++ +G P
Sbjct: 673 RRELATYADHIQIGLAGNLKDYVLRTHTGEAKKGSDI---YTFDGSP 716
>01_07_0291 +
42555233-42555444,42556515-42556550,42556652-42556796,
42556885-42556938,42557130-42557260,42557830-42558056,
42558670-42558846,42558928-42559076
Length = 376
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2
Query: 404 TTHYRANWVPGPPSSEKVPRMSSPCRACSKYPRKVSSGSL 285
+T + P PP+S VP SP A S PR+ SS SL
Sbjct: 14 STSFLIRLSPSPPASSHVPLPRSP--ASSARPRRASSVSL 51
>02_04_0618 - 24428987-24429331,24429946-24430387,24433358-24433434
Length = 287
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 320 SKYPRKVSSGSLPAITTSTLSPELRSARRW*WCRSGGE 207
SK+ RK++ P + E S RR+ W SGGE
Sbjct: 30 SKFTRKINPSLSPIVRNEADCLEAVSPRRFPWSPSGGE 67
>01_06_0061 -
26071984-26072343,26072792-26073139,26073228-26073371,
26073454-26073723,26075019-26075825
Length = 642
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 388 RIGYRAP-PRARKSRECRLPAGPAANIRARCPL 293
R G R P PRAR +R LP+ PAA + + PL
Sbjct: 17 RAGLRLPLPRARSAR-VSLPSSPAAPVSLQSPL 48
>12_01_0541 + 4251931-4254141
Length = 736
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 208 SPPLLHHHHRRAERSSGDSVE 270
SP LLHHHH + G +V+
Sbjct: 352 SPALLHHHHHHSPPPGGGAVD 372
>07_01_0694 - 5248381-5249118
Length = 245
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +1
Query: 175 MMPQHNATAQTSPPLLHHHHRRAERSSGDSVEVVIAGKL 291
M P A+ PPL HHHH R R S +A L
Sbjct: 1 MAPTTPASFLRPPPLPHHHHPRIVRLPPPSATFRVADLL 39
>04_03_0742 +
19200045-19200053,19200158-19200437,19201331-19201545,
19201705-19201792,19202277-19202842
Length = 385
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 377 PGPPSSEKVPRMSSPCRACSKYPRKVSSG 291
P PP E V R+ C C++ RK+ G
Sbjct: 66 PPPPPEEVVMRVYMHCEGCARKVRKILKG 94
>04_01_0312 +
4206400-4206627,4206661-4207269,4207425-4207902,
4208006-4208297,4209278-4209569,4210013-4210465
Length = 783
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +3
Query: 417 WPSFYNVV-TGKTLALPNLIALQH 485
W F N+V +G TL+LP + LQH
Sbjct: 133 WSRFTNLVQSGPTLSLPEYVLLQH 156
>12_01_0319 + 2440129-2440661,2440875-2440902
Length = 186
Score = 27.1 bits (57), Expect = 9.6
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = -2
Query: 377 PGPPSSEKVPRMSSPCRACSKYPRKVSSGSLPAITTSTLSPELRSARRW*WCRSGGEVCA 198
P PP + PR+ + + ++ R++ SG + ++ + E++ AR GG
Sbjct: 52 PPPPRAAAAPRLGAVSLSDIRFVRRLGSGDIGSVYLA----EVKGAR-------GGGAAV 100
Query: 197 VALCCGIMSRQALSGAPVE-RASDTRDVI 114
VA +M R+ L+G E RA R+++
Sbjct: 101 VA--AKVMDRKELAGRNKEGRARTEREIL 127
>11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371
Length = 680
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +3
Query: 417 WPSFYNVV-TGKTLALPNLIALQH 485
W F N+V +G TL+LP + LQH
Sbjct: 414 WSRFTNLVQSGLTLSLPEYVLLQH 437
>08_01_0265 + 2148255-2150219,2150735-2150812
Length = 680
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = +1
Query: 79 YACLCAAVVMLVMTSRVSEARSTGAPLSACRDMMPQHNATAQTSPPLLHHHHRRAERSSG 258
+A L A TS S + + G R +P Q P + HHHH R R G
Sbjct: 18 HAFLPKATSTSTSTSSSSSSAAAGGEALKPRPRLPPPQ---QQQPGVSHHHHTRRRRELG 74
>04_04_1668 + 35217254-35218531
Length = 425
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = +1
Query: 130 SEARSTGAPLSACRDMMPQHNATAQTSPPLLHHHHRRAERSSGDSVEV 273
+++ S APL++ H PP HH H + S +E+
Sbjct: 4 TDSSSAAAPLTSFGRSFLSHRRDQIPPPPPDHHSHSHTQHPSSSDLEI 51
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 211 PPLLHHHHRRAERSS 255
PP HHHHRR R S
Sbjct: 40 PPHHHHHHRRRHRHS 54
>03_06_0765 + 36104604-36105689
Length = 361
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 205 TSPPLLHHHHRRAERSSGDSVEVVIAGKLPEDTLRGYLL-QARQGDDILGTFSL--EGGP 375
T+ P + HHH + + +V+ L D RG+L+ Q R +G F + G P
Sbjct: 32 TTIPAIFHHHPLLLDDAEEDADVIPVIDLQADVDRGHLVGQVRAAAQCVGFFQVVNHGIP 91
Query: 376 G 378
G
Sbjct: 92 G 92
>01_07_0161 + 41574749-41576044
Length = 431
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 327 GLQQISAQGVLWQLTCDHHLHAIAGATLCAS 235
G ++ +G W L+CD H +A LC +
Sbjct: 299 GWDRVGGRGSRWSLSCDVKAHDMAVLCLCVA 329
>01_05_0712 -
24531654-24531874,24532438-24532538,24532621-24532716,
24532951-24533048,24533827-24533883,24534764-24534895,
24535042-24535155,24535227-24535359,24535448-24535678,
24535761-24535843,24536009-24536137,24536504-24536599,
24536719-24536773,24537316-24537386,24537472-24537525,
24537691-24537768,24537985-24538117,24539381-24539496,
24539580-24539651,24540113-24540218,24540657-24540772,
24541170-24541319,24541410-24541492,24541591-24541669,
24542645-24542695
Length = 884
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 368 PSSEKVPRMSSPCRACSKYPRKVSSGSLPAITTSTLSPELRSARR 234
P EK+ ++ +P +KY + + + S ++ T TLS EL ++
Sbjct: 643 PHGEKLVQIENPLAEGTKYLKLLQNNSSDSLETHTLSFELNMRKQ 687
>01_02_0130 -
11424904-11425142,11425295-11425416,11425461-11425546,
11425642-11425858,11426788-11426832,11428385-11428593,
11428706-11428936
Length = 382
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 217 LLHHHHRRAERSSGDSVE 270
LLHHHH +A +++ +VE
Sbjct: 23 LLHHHHNQASKAAAAAVE 40
>01_01_1174 + 9348256-9349734
Length = 492
Score = 27.1 bits (57), Expect = 9.6
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 82 ACLCAAVVMLVMTSRVSEARSTGAPL-SACRDMMPQHNATAQTSPPLLHHHHRRAERSSG 258
A LC A + +MT S + L S C++ TA +SP HH + S+
Sbjct: 346 AGLCLADIGDMMTREFSAMEEGLSALESLCKNAYDSSTTTAGSSPRKHHHSDDSDDESTQ 405
Query: 259 DSVEVVIAGKLPEDTLRG 312
++ V AG P L G
Sbjct: 406 FGMDDVPAGLPPHLFLLG 423
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,504,212
Number of Sequences: 37544
Number of extensions: 338010
Number of successful extensions: 1498
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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