Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0997
         (540 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase pro...    33   0.84 
AL353708-1|CAI41049.1|  671|Homo sapiens torsin A interacting pr...    30   4.5  
BC036749-1|AAH36749.1|  841|Homo sapiens Rho guanine nucleotide ...    29   7.9  
AB020722-1|BAA74938.2|  846|Homo sapiens KIAA0915 protein protein.     29   7.9  

>AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase
           protein.
          Length = 1907

 Score = 32.7 bits (71), Expect = 0.84
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 425 RRPVNCNTTHYRANWVPGPPSSEKVPRMSSPCRACSKYPR 306
           R P+ C+T H +A   PGP SS K P +      C+  PR
Sbjct: 59  RGPLICHTGHEQAGREPGPGSSTKGPVLHDQDTRCAFLPR 98


>AL353708-1|CAI41049.1|  671|Homo sapiens torsin A interacting
           protein 1 protein.
          Length = 671

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 136 ARSTGAPLSACRDMMPQHNATAQTSPPLLHHHHRRAERSS 255
           A +T A   A R+ +P H+    T PP  H HHR+    S
Sbjct: 35  AATTQAAAPATRNCLPDHSGHRPT-PPRSHRHHRQENLGS 73


>BC036749-1|AAH36749.1|  841|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 15 protein.
          Length = 841

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
 Frame = -2

Query: 419 PVNCNTTH--YRANWVP--GPPSSEKVPRMSSPCRACSKYPRKVSSGSLPAITTS 267
           P  C+TT       WVP  G     +VPR +SP R     P   S G    + TS
Sbjct: 211 PCVCHTTRPGLELRWVPVGGYEEVPRVPRRASPLRTSRSRPHPPSIGHPAVVLTS 265


>AB020722-1|BAA74938.2|  846|Homo sapiens KIAA0915 protein protein.
          Length = 846

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
 Frame = -2

Query: 419 PVNCNTTH--YRANWVP--GPPSSEKVPRMSSPCRACSKYPRKVSSGSLPAITTS 267
           P  C+TT       WVP  G     +VPR +SP R     P   S G    + TS
Sbjct: 216 PCVCHTTRPGLELRWVPVGGYEEVPRVPRRASPLRTSRSRPHPPSIGHPAVVLTS 270


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,562,311
Number of Sequences: 237096
Number of extensions: 1836418
Number of successful extensions: 9710
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9683
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)