Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0993
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    23   1.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   3.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   6.0  

>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 129 NCREPL*ILMLIFK 88
           NC+EP+  +MLI+K
Sbjct: 41  NCKEPVETIMLIYK 54


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 352 LIIINTNGRLSPKQTRIFCLGHIQRNSQTIFNVR*ILQKKSFNSNYIGDLM 504
           L I+     L P+  ++  LG   RN++ I  +   L   S + N  GDL+
Sbjct: 104 LAILKQMRNLEPEFLKLDQLGATVRNNRQIRRMVVFLIGVSLSFNLFGDLL 154


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +2

Query: 188 PNNYINGSFFQTRFESNN 241
           P NYIN   F      NN
Sbjct: 39  PQNYINSYLFSLSLAQNN 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,457
Number of Sequences: 336
Number of extensions: 2526
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)