Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0990
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.48 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         24   0.85 
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   3.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.0  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 346 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 441
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 218 PSIVGRPRHQGVRSVWDR 271
           P ++G+P H+ V  VW++
Sbjct: 9   PEMMGKPIHEEVAQVWEQ 26


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 315 PDPQIPHRTRNRH 353
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 109 KLVRCRCDKMKIKRPAVTANREKQIP 32
           K  R   D+ ++ RPA  ANR    P
Sbjct: 330 KRPRPNIDRHEVTRPAAPANRGNGFP 355


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 430 RGVPRGRHAAHCRRYDAKSSP 368
           RG P    AA C +   KS P
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPP 53


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 384 MPNLLHVIPVSDDSVFD 334
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 384 MPNLLHVIPVSDDSVFD 334
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 384 MPNLLHVIPVSDDSVFD 334
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 384 MPNLLHVIPVSDDSVFD 334
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 238 PPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 345
           PP    VG+    S++  +   K+ +    YP E+G
Sbjct: 41  PPKRAPVGLSLAASHLQQQQLKKQRLDNGDYPYENG 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,679
Number of Sequences: 336
Number of extensions: 3399
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)