Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0990
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 199 1e-51
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 199 1e-51
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 199 1e-51
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 199 1e-51
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 199 1e-51
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 199 1e-51
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 199 1e-51
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 199 1e-51
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 199 1e-51
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 197 4e-51
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 197 4e-51
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 122 2e-28
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 98 5e-21
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 97 8e-21
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 97 8e-21
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 96 2e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 96 2e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 93 1e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 67 1e-11
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.005
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.005
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 29 2.5
Z70752-4|CAA94756.2| 363|Caenorhabditis elegans Hypothetical pr... 28 4.4
U88172-6|AAB42261.1| 310|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL021493-7|CAA16389.3| 345|Caenorhabditis elegans Hypothetical ... 28 4.4
Z83231-2|CAB05750.1| 357|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 7.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 7.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 97/119 (81%), Positives = 100/119 (84%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 408
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYAFRSVPPGIVL 585
VAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P + VLSLYA GIVL
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA-SGRTTGIVL 154
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 97/119 (81%), Positives = 100/119 (84%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 408
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYAFRSVPPGIVL 585
VAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P + VLSLYA GIVL
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA-SGRTTGIVL 154
Score = 94.3 bits (224), Expect = 6e-20
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/109 (85%), Positives = 96/109 (88%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 408
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYA 555
VAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P + VLSLYA
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/109 (85%), Positives = 96/109 (88%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 408
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYA 555
VAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P + VLSLYA
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/109 (85%), Positives = 96/109 (88%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 408
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYA 555
VAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P + VLSLYA
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 199 bits (485), Expect = 1e-51
Identities = 93/109 (85%), Positives = 96/109 (88%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 408
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYA 555
VAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P + VLSLYA
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/109 (85%), Positives = 96/109 (88%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 408
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYA 555
VAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P + VLSLYA
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 199 bits (485), Expect = 1e-51
Identities = 93/109 (85%), Positives = 96/109 (88%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 408
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 23 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 82
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYA 555
VAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P + VLSLYA
Sbjct: 83 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 131
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 176 KAGFAGDDAPRAVFPSIVGRPRHQGV 253
+AGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGV 30
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/109 (85%), Positives = 96/109 (88%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 408
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYA 555
VAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P + VLSLYA
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 197 bits (481), Expect = 4e-51
Identities = 95/119 (79%), Positives = 100/119 (84%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 408
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 95
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYAFRSVPPGIVL 585
+APEEHPVLLTEAPLNPK+NREKMTQIMFETFN+P + VLSLYA GIVL
Sbjct: 96 IAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYA-SGRTTGIVL 153
Score = 90.6 bits (215), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +2
Query: 128 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 43
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 197 bits (481), Expect = 4e-51
Identities = 91/100 (91%), Positives = 93/100 (93%)
Frame = +1
Query: 256 VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 435
VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL
Sbjct: 2 VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 61
Query: 436 LTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYA 555
LTEAPLNPKANREKMTQIMFETFN+P + VLSLYA
Sbjct: 62 LTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 101
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 122 bits (294), Expect = 2e-28
Identities = 53/95 (55%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +1
Query: 274 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 450
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 451 LNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYA 555
LNP NRE+ +I FETFN P + VLSLYA
Sbjct: 114 LNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYA 148
Score = 47.6 bits (108), Expect = 7e-06
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +2
Query: 146 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ V
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRV 46
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 97.9 bits (233), Expect = 5e-21
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Frame = +1
Query: 271 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEA 447
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 448 PLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYAFRSVPPGIVL 585
PLNP +NREKM Q+MFE + + VL+LYA + + G+V+
Sbjct: 113 PLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYA-QGLLTGVVV 157
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 146 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 238
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
Score = 93.5 bits (222), Expect = 1e-19
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 378
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
Score = 93.5 bits (222), Expect = 1e-19
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 378
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
Score = 93.5 bits (222), Expect = 1e-19
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 378
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
Score = 87.8 bits (208), Expect = 5e-18
Identities = 40/47 (85%), Positives = 41/47 (87%)
Frame = +1
Query: 229 GKAPPSGREVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 369
G+ G VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 93.5 bits (222), Expect = 1e-19
Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +1
Query: 259 GMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 435
G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H L
Sbjct: 59 GIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFL 118
Query: 436 LTEAPLNPKANREKMTQIMFETFNSPPCTSPSKPVLSLYA 555
LTE PLN NRE +IMFE+FN P + VL+L A
Sbjct: 119 LTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTA 158
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 229
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +1
Query: 334 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 513
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 514 PCTSPSKPVLSLYA 555
VLS +A
Sbjct: 154 AYYLSKNVVLSCFA 167
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 131 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 229
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 268 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 441
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 442 EAPLNPKANREKMTQIMFETF 504
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 268 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 441
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 442 EAPLNPKANREKMTQIMFETF 504
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 494 SKHSTARHVRRHPSPCSRCTRSGPYHPVSCLDF 592
S+ V+ +P PC +C R+ YH + DF
Sbjct: 598 SQQLVPEKVKSNPDPCQKCFRTSEYHNKTKEDF 630
>Z70752-4|CAA94756.2| 363|Caenorhabditis elegans Hypothetical
protein F25B3.4 protein.
Length = 363
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 265 PYRPHALMAGPSHDRGKHCARSII 194
P+R + L G DRGKHC +I+
Sbjct: 131 PHRANYLFLGDYVDRGKHCLETIL 154
>U88172-6|AAB42261.1| 310|Caenorhabditis elegans Hypothetical
protein ZK354.9 protein.
Length = 310
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 265 PYRPHALMAGPSHDRGKHCARSII 194
P+R + L G DRGKHC +I+
Sbjct: 66 PHRANYLFLGDYVDRGKHCLETIL 89
>AL021493-7|CAA16389.3| 345|Caenorhabditis elegans Hypothetical
protein Y51A2B.4 protein.
Length = 345
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 500 HSTARHVRRHPSPCSRCTRSGPYHPVSCLDFP 595
H RH R PC +R+GPYH + + +P
Sbjct: 231 HKDYRHWPRADLPCDPRSRTGPYHHSTEIWYP 262
>Z83231-2|CAB05750.1| 357|Caenorhabditis elegans Hypothetical
protein F57G9.2 protein.
Length = 357
Score = 27.9 bits (59), Expect = 5.8
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = -1
Query: 542 STGLDGDVHGGLLNVSNMIWVIFSLLALGLRG--ASVSRTGCSSGATR--SSL*KV*CQI 375
S+GL+ + GG L + ++F +LA+ ASV S + + Q+
Sbjct: 116 SSGLELLIFGGFLQWHTIYSIVFGILAVATERTIASVYIKDYESKERIYIPIILTIISQL 175
Query: 374 FSMSSQLVTIPCSMGYLRVRIPLLLCA 294
S+S L I S+G R+P ++CA
Sbjct: 176 LSISISLAIITQSIGPFLARLPFVICA 202
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 176 KAGFAGDDAPRAVFPSIVGRPRHQG 250
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 201 ASSPAKPALHIPEPLSTTNAATSS 130
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 201 ASSPAKPALHIPEPLSTTNAATSS 130
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 201 ASSPAKPALHIPEPLSTTNAATSS 130
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 201 ASSPAKPALHIPEPLSTTNAATSS 130
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,235,210
Number of Sequences: 27780
Number of extensions: 353170
Number of successful extensions: 1201
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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