Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0988
         (629 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051787-1|AAK93211.1|  832|Drosophila melanogaster LD30525p pro...    28   9.1  
AE014296-3184|AAN11654.1|  832|Drosophila melanogaster CG8798-PB...    28   9.1  
AE014296-3183|AAF49134.1| 1006|Drosophila melanogaster CG8798-PA...    28   9.1  

>AY051787-1|AAK93211.1|  832|Drosophila melanogaster LD30525p
           protein.
          Length = 832

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 361 LFDETDFMHRPEI*LLLLIEARDLSRLYSLHGRSFHEEDKHEQSR 227
           + +ETD   R ++ L LL +  +LSRL    GR   E+ K +  +
Sbjct: 198 ILEETDIPERLQLALTLLKKELELSRLQQKIGREVEEKVKQQHRK 242


>AE014296-3184|AAN11654.1|  832|Drosophila melanogaster CG8798-PB,
           isoform B protein.
          Length = 832

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 361 LFDETDFMHRPEI*LLLLIEARDLSRLYSLHGRSFHEEDKHEQSR 227
           + +ETD   R ++ L LL +  +LSRL    GR   E+ K +  +
Sbjct: 198 ILEETDIPERLQLALTLLKKELELSRLQQKIGREVEEKVKQQHRK 242


>AE014296-3183|AAF49134.1| 1006|Drosophila melanogaster CG8798-PA,
           isoform A protein.
          Length = 1006

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 361 LFDETDFMHRPEI*LLLLIEARDLSRLYSLHGRSFHEEDKHEQSR 227
           + +ETD   R ++ L LL +  +LSRL    GR   E+ K +  +
Sbjct: 372 ILEETDIPERLQLALTLLKKELELSRLQQKIGREVEEKVKQQHRK 416


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,839,941
Number of Sequences: 53049
Number of extensions: 446069
Number of successful extensions: 828
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)