Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0987
(359 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q28RA2 Cluster: ComEC/Rec2-related protein; n=2; Rhodob... 36 0.21
UniRef50_UPI0000519CB3 Cluster: PREDICTED: similar to CG5859-PA;... 35 0.49
UniRef50_A2YBF3 Cluster: Putative uncharacterized protein; n=3; ... 33 1.1
UniRef50_UPI000155BF0A Cluster: PREDICTED: similar to protocadhe... 32 2.6
UniRef50_UPI00005A9609 Cluster: PREDICTED: similar to USP6 N-ter... 32 2.6
UniRef50_A2DGT3 Cluster: Putative uncharacterized protein; n=1; ... 31 4.6
UniRef50_Q4S0K4 Cluster: Chromosome 2 SCAF14781, whole genome sh... 31 6.1
UniRef50_UPI000069E823 Cluster: Methyl-CpG-binding domain protei... 31 8.0
UniRef50_Q39DZ5 Cluster: Sensor protein; n=28; Burkholderia|Rep:... 31 8.0
UniRef50_Q6BQD7 Cluster: Similar to CA3685|IPF19540 Candida albi... 31 8.0
>UniRef50_Q28RA2 Cluster: ComEC/Rec2-related protein; n=2;
Rhodobacteraceae|Rep: ComEC/Rec2-related protein -
Jannaschia sp. (strain CCS1)
Length = 706
Score = 35.9 bits (79), Expect = 0.21
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 43 PEGLSSFTRTGGRAKAQPRGVGFANNCPSASEGDLTTQE 159
P GL T GRA ++PRG GF ++GDL TQE
Sbjct: 540 PGGLVGLTTDQGRALSRPRGDGFVAGIWLENDGDLITQE 578
>UniRef50_UPI0000519CB3 Cluster: PREDICTED: similar to CG5859-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG5859-PA
- Apis mellifera
Length = 986
Score = 34.7 bits (76), Expect = 0.49
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 83 QRLSQEGWDLLTTARAPPKET*QLKSNCFANESTTGSESR 202
++ S+E WD++ TA P ++ Q +SN + ++TGS SR
Sbjct: 697 RKFSREAWDMVLTAFGPSRDQPQKRSNSGNSGTSTGSASR 736
>UniRef50_A2YBF3 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 575
Score = 33.5 bits (73), Expect = 1.1
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Frame = -3
Query: 345 LHYMHSALILGAGLGTPVTVLVELDKEVDVHLTHASAR*VSSRIFSAGRDSDPVVDSFAK 166
L+ MH +L GLG P+++ VEL D+ + AR R+ + +V++ +
Sbjct: 114 LNPMHQVNLLTTGLGKPLSIDVELQNPADLQAAMSLARSYEQRLEDDAVAAPRIVENKQR 173
Query: 165 QLL--LSC*VSFGGARAVVS--KSHPSWLSLCSPTCPGETGKAF 46
+L S V S S + ++ SPT PG TG F
Sbjct: 174 SVLSFRSAPAPVPAPSRVGSSMSSSAAIVASKSPTRPGTTGTRF 217
>UniRef50_UPI000155BF0A Cluster: PREDICTED: similar to protocadherin
gamma B5; n=2; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to protocadherin gamma B5 - Ornithorhynchus
anatinus
Length = 1443
Score = 32.3 bits (70), Expect = 2.6
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = -3
Query: 306 LGTPVTVLVELDKEVDVHLTHASAR*VSSRIFSAGRDSDPVVDSF-AKQLLLSC*VSFGG 130
L T VT+LV L+ + HA+ V SA D D + + A L+ C VSFG
Sbjct: 1233 LSTSVTLLVSLEDDA-----HAALSDVGDS--SAQPDGDSRLTLYLAVSLVAICFVSFGS 1285
Query: 129 ARAVVSKSHPSWLSLCSPTCPGETGKAFGPP 37
A++++ S C P+CP G P
Sbjct: 1286 FVALLTRCLRG--SACCPSCPARARACLGRP 1314
>UniRef50_UPI00005A9609 Cluster: PREDICTED: similar to USP6
N-terminal like protein (Related to the N terminus of
tre) (RN-tre), partial; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to USP6 N-terminal like protein
(Related to the N terminus of tre) (RN-tre), partial -
Canis familiaris
Length = 386
Score = 32.3 bits (70), Expect = 2.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 158 SNCFANESTTGSESRPAEKIRLETQRADAWVR 253
S C ++ G R A+K+R ET RAD W++
Sbjct: 27 SPCAGDKELPGPSPREAKKLRQETWRADKWIK 58
>UniRef50_A2DGT3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 488
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 62 SPGQVGEQRLSQEGWDLLTTARAPPKET*QLKSNCFA-NESTTGSESRPAEKIRLET 229
S +G+ ++QE D LTT+R + K+N A ++TT S + PA ++++ T
Sbjct: 78 SENSLGKSPITQEAIDNLTTSRQKFYDQADTKNNRIAITKTTTESSTNPAPRVQVTT 134
>UniRef50_Q4S0K4 Cluster: Chromosome 2 SCAF14781, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 2
SCAF14781, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 862
Score = 31.1 bits (67), Expect = 6.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 37 WWPEGLSSFTRTGGRAKAQPRGVGFANNCPSASE 138
W+ E S + G R +A+PR G A + P+ASE
Sbjct: 374 WFEEASESQSSRGTRPQARPRAGGSAQSAPAASE 407
>UniRef50_UPI000069E823 Cluster: Methyl-CpG-binding domain protein 6
(Methyl-CpG binding protein MBD6).; n=1; Xenopus
tropicalis|Rep: Methyl-CpG-binding domain protein 6
(Methyl-CpG binding protein MBD6). - Xenopus tropicalis
Length = 801
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 143 SPSEALGQLLANPTPLG*AFARPPVLVKLERPS 45
SP ++ G + +PLG + PPV+ KLE PS
Sbjct: 404 SPQDSSGHFPPSGSPLGLSKLNPPVMSKLESPS 436
>UniRef50_Q39DZ5 Cluster: Sensor protein; n=28; Burkholderia|Rep:
Sensor protein - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 438
Score = 30.7 bits (66), Expect = 8.0
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -1
Query: 248 PMHQPAEFLAGSSQRVAIPIR**IHSRNNCS*VVRSPSEALGQLLANPTPLG*AFARPPV 69
P+ Q E +A S + VA P + +R + R P+ L ++L+N A+ PPV
Sbjct: 284 PVDQACERIARSYRAVA-PNAPTVQTRLDADPGFRLPTATLDRILSNLLDNAHAYGAPPV 342
Query: 68 LVKLER-PSGH 39
LV+ R P+G+
Sbjct: 343 LVETARTPTGY 353
>UniRef50_Q6BQD7 Cluster: Similar to CA3685|IPF19540 Candida
albicans IPF19540 unknown function; n=1; Debaryomyces
hansenii|Rep: Similar to CA3685|IPF19540 Candida
albicans IPF19540 unknown function - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 472
Score = 30.7 bits (66), Expect = 8.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 77 GEQRLSQEGWDLLTT-ARAPPKET*QLKSNCFANESTTGSESRPAEKIRL 223
GE R S+E +L + PK+T +L ++ FANE T + + A K R+
Sbjct: 58 GESRQSEESSELRDSDPEEHPKDTQELMNSKFANEYNTNTRKKRASKGRV 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,668,191
Number of Sequences: 1657284
Number of extensions: 5362345
Number of successful extensions: 13461
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13460
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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