BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0987 (359 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0039 - 271926-273503 33 0.051 02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580 27 3.4 01_05_0412 + 21929446-21929713,21931402-21931501,21931755-21931827 27 4.4 06_03_0290 - 19193707-19193752,19193822-19194090 27 5.9 03_02_0759 + 10959028-10959135,10959238-10959807 27 5.9 03_05_0019 + 19862171-19863049 26 7.7 >02_01_0039 - 271926-273503 Length = 525 Score = 33.5 bits (73), Expect = 0.051 Identities = 25/100 (25%), Positives = 43/100 (43%) Frame = -3 Query: 345 LHYMHSALILGAGLGTPVTVLVELDKEVDVHLTHASAR*VSSRIFSAGRDSDPVVDSFAK 166 L+ MH + AGLG P+++ VEL ++ + AR R+ + +V++ + Sbjct: 164 LNPMHQVNLFTAGLGKPLSIDVELQNTANLQAAMSLARSYEQRLEDDAVAAPRIVENKQR 223 Query: 165 QLLLSC*VSFGGARAVVSKSHPSWLSLCSPTCPGETGKAF 46 L + S + ++ SPT PG TG F Sbjct: 224 SALSFRSAPAPSRVGSSTSSSAAIVASKSPTRPGTTGTRF 263 >02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580 Length = 726 Score = 27.5 bits (58), Expect = 3.4 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = -3 Query: 189 PVVDSFAKQLLLSC*VSFGGARAVVSKSHPSWLSLCSPTCPGET 58 P F +LL F A VV ++H SW L SP+ G + Sbjct: 671 PFSSPFMTLVLLKRKAMFDHAPPVVKRAHSSWALLSSPSDDGHS 714 >01_05_0412 + 21929446-21929713,21931402-21931501,21931755-21931827 Length = 146 Score = 27.1 bits (57), Expect = 4.4 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = -1 Query: 152 VVRSPSEALGQLLANPTPLG*AFARPPVLVKLE 54 + R+ S LG+LLA+P+PL P +L +++ Sbjct: 7 LARAGSSLLGRLLASPSPLRAGLPPPSLLSRIQ 39 >06_03_0290 - 19193707-19193752,19193822-19194090 Length = 104 Score = 26.6 bits (56), Expect = 5.9 Identities = 9/32 (28%), Positives = 12/32 (37%) Frame = -3 Query: 132 GARAVVSKSHPSWLSLCSPTCPGETGKAFGPP 37 G S+ P W C C + +F PP Sbjct: 29 GGTPAASRGLPGWPGFCGVGCGSSSSSSFAPP 60 >03_02_0759 + 10959028-10959135,10959238-10959807 Length = 225 Score = 26.6 bits (56), Expect = 5.9 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = -3 Query: 132 GARAVVSKSHPSWLSLCSPTCPG 64 G+ AV S PS LS CSP PG Sbjct: 163 GSTAVERVSPPSILSACSPAPPG 185 >03_05_0019 + 19862171-19863049 Length = 292 Score = 26.2 bits (55), Expect = 7.7 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +2 Query: 77 GEQRLSQEGWDLLTTARAPPKET*QLKSNC 166 G +L Q WD+L+T PP T S C Sbjct: 119 GAFKLVQTAWDVLSTRHPPPGATAAAASVC 148 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,722,008 Number of Sequences: 37544 Number of extensions: 160420 Number of successful extensions: 338 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 330 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 338 length of database: 14,793,348 effective HSP length: 73 effective length of database: 12,052,636 effective search space used: 554421256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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